CCGTTCATNNNNGGTTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTCTGTTTAGTTCTATATCTCATTTTTTTTGAT
TGAGTTTTTTGGTTTTTTTGGAGTTTACCTTCTTGAGTTTTTTATATATT
TTGGATATTAGTCCTCTATCAGATGTAAGGTTAGTAAAGTTTTTTTTTTC
CCAATCTGTGGGTTGCCAATTATTCCTATTGACAGTATCTTTTGCCTTAC
AGAAGCTTTTCAGTTTCATGAGGTCCCATTTATCAATTGTTGATCTTAGA
GCGAGAGCTATTGGAGTTCTGTTCAGGAAATTAACCCCTGTGCCAATGAG
TTCGAACCTCTTTCCCACTTTCTCCTTCTTTTAGATTCAGTGTATCTGGT
TTTATGTTAAGTGCCTTGGATGCAGTTTGGACTTGGACCTTTGTTGTAAA
GGGGATAAAATAAAGGGAACCAAATTTTCCATTCCCCCCCAAACAAAAAC
AGAACTTGGTCCGGTTTTTAAAACCCCCCCCCCCCCCTTTTTTTTTTTAA
TAAAATATTTGGGGGCGGTGTTTTTTTCTTNTCTCCTTCCCTTTATGGTT
GTAGCTCGCTCTTTATGTAACGTTCCAACAAACAANNNNNTCTTCCTTTT
TTTCTTTTACCGTTAACTATCTCTCGTTCTCTTGTGCTACCTCTCTATCA
CCCTCATCATTACTCTTTCTTCTTTATGCCATTTCGTTTAATTTAAGTCA
AGTCTGTTATAACATTAATCCTGTCTCCTTTATATTTTTCATATTCCC

NCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACAGAGCTGAGGGGAAGGAGGTCT
CACTGTTCGTCTCTAGGGTAACTAAGAGAGAGCAGAGTCAGATGCATTGC
AGTAGGCTGTAGGGGTGAACTAGAGATGGTGAAGATCTTAAAAAGAATTT
TTTCATGATTTTTAGGCCACCGTCTGTTCCCTGCTCTAACCAGAACTATG
CTGCCTTGATGATTACAAGAGTCTTCCTCATCCTGTTTGGAGATGGAGTG
GAACACTTGAGACATGTGACTGGTTTCCTTTCCACAGAGCCGGGTGGAGG
GAAAGGATAGGAGAAAAGTGGGGTAGCAGAGAAGAGACAGCAGTTAGACA
ATTCCTAGAGCCAAAGAGAAGCAAGGAGATACCAGAAATGACTCTAAGAT
GCATAGTGTCTGAGGTTCATGGCCTTATATGCAAAAGCACACAGAAAGGG
GGACTGGACCCCTAAGAACCACTTCAGGAAGCTCTCTTGATCAGGACTTG
CAAGATGTTGAGGCCTCCTATAGGACTTTATTTTCCCCCCAGAGTCGGAA
ACCCAGGATGACTACTCCTCCTCTTAGGCGGGAGGAAAGTAGTTTGGGTA
TGTCCTACCCCGGAGACTTCTCGAATTTCTGGCGGGTTTTTGTTCCTCAC
CTGCCAATGGTTCTTTTTCCTGGGACACGGCGTGTTCGTCTCACTGTTAT
AAACTCCCTCTTTCGATCCGG

Query= MSMg01no364_a03.g1 MSMg01no364_a03.g1 CHROMAT_FILE:
MSMg01no364_a03.g1 PHD_FILE: MSMg01no364_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:56 2005
         (433 letters)



>mm_chr1_107780292_107781123
          Length = 832

 Score =  791 bits (409), Expect = 0.0
 Identities = 427/433 (98%), Gaps = 1/433 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagagctgaggggaaggaggtctcactgttcgtctctagggtaactaagagagagcaga 60
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||
Sbjct: 632 acagagctgaggggaaggaggcctcactgttcctctctagggtaactaagagagaacaga 573

                                                                       
Query: 61  gtcagatgcattgcagtaggctgtaggggtgaactagagatggtgaagatcttaaaaaga 120
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 572 gtcagatgcattgcagtaggctgtgggggtgaactagagatggtgaagatcttaaaaaga 513

                                                                       
Query: 121 attttttcatgatttttaggccaccgtctgttccctgctctaaccagaactatgctgcct 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 a-tttttcatgatttttaggccaccgtctgttccctgctctaaccagaactatgctgcct 454

                                                                       
Query: 181 tgatgattacaagagtcttcctcatcctgtttggagatggagtggaacacttgagacatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgatgattacaagagtcttcctcatcctgtttggagatggagtggaacacttgagacatg 394

                                                                       
Query: 241 tgactggtttcctttccacagagccgggtggagggaaaggataggagaaaagtggggtag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgactggtttcctttccacagagccgggtggagggaaaggataggagaaaagtggggtag 334

                                                                       
Query: 301 cagagaagagacagcagttagacaattcctagagccaaagagaagcaaggagataccaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cagagaagagacagcagttagacaattcctagagccaaagagaagcaaggagataccaga 274

                                                                       
Query: 361 aatgactctaagatgcatagtgtctgaggttcatggccttatatgcaaaagcacacagaa 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 273 aatgactctaagatgcatagtgtctgaggtccatggccttatatgcaaaagcacacagaa 214

                        
Query: 421 agggggactggac 433
           |||||||||||||
Sbjct: 213 agggggactggac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 832
Length adjustment: 9
Effective length of query: 424
Effective length of database: 823
Effective search space:   348952
Effective search space used:   348952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)