Query= MSMg01no365_j17.b1 MSMg01no365_j17.b1 CHROMAT_FILE:
MSMg01no365_j17.b1 PHD_FILE: MSMg01no365_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:09 2005
(437 letters)
>mm_chr1_112136527_112137363
Length = 837
Score = 712 bits (368), Expect = 0.0
Identities = 374/376 (99%)
Strand = Plus / Minus
Query: 5 gaattctgttatttacctaaacttagtaaacaaaatcattactaaatagacatcaataaa 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattctgttaattacctaaacttagtaaacaaaatcattactaaatagacatcaataaa 317
Query: 65 aaagattgaaataattgtaaacatgttagcatgtgggttatttaaattatatgcaaagtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaagattgaaataattgtaaacatgttagcatgtgggttatttaaattatatgcaaagtg 257
Query: 125 atgttaaaaagaagactaacaaccaaaaatctgcaaaccccaaccgttggattgttggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atgttaaaaagaagactaacaaccaaaaatctgcaaaccccaaccgttggattgttggtc 197
Query: 185 acatgtcttctctgccacagggtaaagtagctggggaggtggaacatgggaagtatgact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acatgtcttctctgccacagggtaaagtagctggggaggtggaacatgggaagtatgact 137
Query: 245 gtgcttatcccatgctgctgcagaggcgagtgttaggctacagggaagacctgaggcacc 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gtgcttatcccatgctgttgcagaggcgagtgttaggctacagggaagacctgaggcacc 77
Query: 305 actccgagggtgggaaagtagagtagtctgattcatgggaaaaccacagatggttcagtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 actccgagggtgggaaagtagagtagtctgattcatgggaaaaccacagatggttcagtg 17
Query: 365 ttccctggaccttcac 380
||||||||||||||||
Sbjct: 16 ttccctggaccttcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_j17.g1 MSMg01no365_j17.g1 CHROMAT_FILE:
MSMg01no365_j17.g1 PHD_FILE: MSMg01no365_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:09 2005
(438 letters)
>mm_chr1_111964926_111965763
Length = 838
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 ttgcctttaggataactttcctctaacctttggaactttcctactactggatgcctgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgcctttaggataactttcctctaacctttggaactttcctactactggatgcctgtct 260
Query: 61 ttaaatgttacaaattctttttatggtaagtatcttggctgaaacctgaaagctgctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaatgttacaaattctttttatggtaagtatcttggctgaaacctgaaagctgctttg 320
Query: 121 gtgtttgttgggttttgtgtgtttttttattgttttgtttttctaaaaaactcaacatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtttgttgggttttgtgtgtttttttattgttttgtttttctaaaaaactcaacatga 380
Query: 181 tttttgttttgtttcatttgcatgatttgtgtgtgtgttt-ttgttgttgttgttgctat 239
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 381 tttttgttttgtttcatttgcatgatttgtgtgtgtgtgtgttgttgttgttgttgctat 440
Query: 240 tgctgttttgcactcttctgttgctctttttccctgtagaacatggtaagtgtggtgagt 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgttttgccctcttctgttgctctttttccctgtagaacatggtaagtgtggtgagt 500
Query: 300 aataacagtgacagaaaatgaatgctttgctgactgactttatattttctctgccaaaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataacagtgacagaaaatgaatgctttgctgactgactttatattttctctgccaaaca 560
Query: 360 ttattctgttacgtttaaatttaaccacattgaagtttgcaagacaaagtcataaagcat 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattctgttacgtttaaatttaaacacattgaagtttgcaagacaaagtcataaagcat 620
Query: 420 ctaaatcctttatcagatt 438
|||||||||||||||||||
Sbjct: 621 ctaaatcctttatcagatt 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
