Query= MSMg01no366_a18.b1 MSMg01no366_a18.b1 CHROMAT_FILE:
MSMg01no366_a18.b1 PHD_FILE: MSMg01no366_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:45 2005
(447 letters)
>mm_chr1_92722932_92723778
Length = 847
Score = 835 bits (432), Expect = 0.0
Identities = 441/444 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttttgcttctgaatgtacctgaggggtttgaagcaagctaggggagggacaca 63
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttgcttctgaatgtacctgaggagtttgaagcaagctaggggagggacaca 263
Query: 64 ctgatgagatgccccctggctggcaagctctggcttttagtgagtgttcctgcaagtcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgatgagatgccccctggctggcaagctctggcttttagtgagtgttcctgcaagtcca 323
Query: 124 cagtcatttcccaagtgggagccttcatcatatctctgtgatctttgttccaaatagctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagtcatttcccaagtgggagccttcatcatatctctgtgatctttgttccaaatagctc 383
Query: 184 caaccccaggctcccagacctgacactctcctccactcctgcccattctacctaggagct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaccccaggctcccagacctgacactctcctccactcctgcccattctacctaggagct 443
Query: 244 cagcttccccatcccagaatcctagggatgcagacccttcctcttctggaggagaggtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagcttccccatcccagaatcctagggatgcagacccttcctcttctggaggagaggtga 503
Query: 304 gtctctcccagcatgcctctctactccccaccattctttcctacttgtgtccttcaagga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtctctcccagcatgcctctctactccccaccattctttcctacttgtgtccttcaagga 563
Query: 364 cctgtgctctggcacagggcgccctgtcccccacccctagctgatgagaaagctattcct 423
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctgtgctctggcacagggtgccctgtcccccacccctagctgatgagaaagctattcct 623
Query: 424 agccactaggcaaaactgctgtta 447
|||||||||||||||||||||||
Sbjct: 624 ggccactaggcaaaactgctgtta 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_a18.g1 MSMg01no366_a18.g1 CHROMAT_FILE:
MSMg01no366_a18.g1 PHD_FILE: MSMg01no366_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:45 2005
(390 letters)
>mm_chr1_92899267_92900052
Length = 786
Score = 673 bits (348), Expect = 0.0
Identities = 378/390 (96%), Gaps = 4/390 (1%)
Strand = Plus / Minus
Query: 1 aggccctagtgtgctgtcacagtgggggtggggtagggcacgggaactatgacagaggcc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 586 aggccctagtgtgctgtcacagtgggggtggggtagggcatgggaactatgacagaggcc 527
Query: 61 aggaatctgtcataatagctagctgaattcttcccagatcactcaatccaagaaagccac 120
|||| | |||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 526 aggagtttgtcat----gatagctgaattcttcccagatccctcaatccaagaaagccac 471
Query: 121 gtcaccttggtgccaaagttagcagaggtaagggtctaaaatgagctagacccatgagca 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 470 gtcaccttggtgccaaaggtagcagaggtaagggtctaaaatgagctagacccatgaaca 411
Query: 181 caccccaacctattgatatcccaatggccttgaagcttgagcaagcagatgtatagacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 caccccaacctattgatatcccaatggccttgaagcttgagcaagcagatgtatagacag 351
Query: 241 gctcaccttacacaggtagagtcctgaggtctgcttgggaggatgagcagagcacgtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gctcaccttacacaggtagagtcctgaggtctgcttgggaggatgagcagagcacgtgga 291
Query: 301 tggactatctcagtaggattgcccagcccaggagtggtgctcacaggaggtctcctagga 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 290 tggactatctcagtaggattgcccagcccaggagtggtgctcacagcaggtctcctagga 231
Query: 361 gacaagcctgcagcctgcacatggctgcta 390
||||||||||||||||||||||||||||||
Sbjct: 230 gacaagcctgcagcctgcacatggctgcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 786
Length adjustment: 9
Effective length of query: 381
Effective length of database: 777
Effective search space: 296037
Effective search space used: 296037
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
