MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-366O14
Chromosome	1 (Build37)
Map Location	45,001,844 - 45,002,150
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Tpp2, A530098C11Rik, EG666713, 1700029F09Rik, Kdelc1, Bivm, Ercc5, 4832428D23Rik, LOC435619, Txn-ps1, Gulp1, LOC100041738, LOC100041752
Downstream gene	LOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tpp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22019 MGI:102724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A530098C11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433294 MGI:3611450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666713 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666713 MGI:3647616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	1700029F09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75623 MGI:1922873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 76 ESTs, 4 Proteins

name	Kdelc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72050 MGI:1919300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bivm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246229 MGI:2179809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ercc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22592 MGI:103582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4832428D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403183 MGI:2685837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435619 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435619
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Txn-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22167 MGI:98875
definition	note : thioredoxin, pseudogene 1 pseudo : _no_value

name	Gulp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70676 MGI:1920407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041738 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041738
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100041752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC383640 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383640
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Col3a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12825 MGI:88453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col5a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12832 MGI:88458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666799 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666799 MGI:3648466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC631429 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:631429
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC666814 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666814
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG666819 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666819 MGI:3646941
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Wdr75 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73674 MGI:1920924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433297 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433297 MGI:3643066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 29 Proteins

name	LOC383644 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	Slc40a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53945 MGI:1315204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803002 GeneID:22019 MGI:102724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripeptidyl peptidase II transcript_id : NM_009418.2

name	A530098C11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701483 GeneID:433294 MGI:3611450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A530098C11 gene transcript_id : NM_001013799.1

name	EG666713 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233809 GeneID:666713 MGI:3647616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666713 transcript_id : XM_985572.2

name	1700029F09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363294 GeneID:75623 MGI:1922873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 73 ESTs, 4 Proteins product : RIKEN cDNA 1700029F09 gene, transcript variant 7 transcript_id : XM_899759.2

name	1700029F09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363290 GeneID:75623 MGI:1922873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 47 ESTs, 4 Proteins product : RIKEN cDNA 1700029F09 gene, transcript variant 9 transcript_id : XM_899774.2

name	1700029F09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233851 GeneID:75623 MGI:1922873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 4 Proteins product : RIKEN cDNA 1700029F09 gene, transcript variant 10 transcript_id : XM_899782.3

name	Kdelc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801753 GeneID:72050 MGI:1919300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KDEL (Lys-Asp-Glu-Leu) containing 1 transcript_id : NM_023645.3

name	Bivm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363741 GeneID:246229 MGI:2179809
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic, immunoglobulin-like variable motif containing transcript_id : NM_144558.3

name	Ercc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6756022 GeneID:22592 MGI:103582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : excision repair cross-complementing rodent repair deficiency, complementation group 5 transcript_id : NM_011729.1

name	4832428D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373908 GeneID:403183 MGI:2685837
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4832428D23 gene transcript_id : NM_207281.2

name	Gulp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130377 GeneID:70676 MGI:1920407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GULP, engulfment adaptor PTB domain containing 1 transcript_id : NM_027506.2

name	Gulp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28201935 GeneID:70676 MGI:1920407
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GULP, engulfment adaptor PTB domain containing 1 transcript_id : NM_028450.1

name	Col3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859525 GeneID:12825 MGI:88453
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type III, alpha 1 transcript_id : NM_009930.1

name	Col5a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86613789 GeneID:12832 MGI:88458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type V, alpha 2 transcript_id : NM_007737.2

name	LOC666814 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233814 GeneID:666814
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ac2-210 transcript_id : XM_001477007.1

name	Wdr75 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801733 GeneID:73674 MGI:1920924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 75 transcript_id : NM_028599.2

name	EG433297 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363352 GeneID:433297 MGI:3643066
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 190 ESTs, 29 Proteins product : predicted gene, EG433297 transcript_id : XM_484859.4

name	Slc40a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248584 GeneID:53945 MGI:1315204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 40 (iron-regulated transporter), member 1 transcript_id : NM_016917.2

name	Tpp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678419 CCDS:CCDS14926.1 GeneID:22019 MGI:102724
definition	GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0004289 - subtilase activity [Evidence IEA]; GO:0004294 - tripeptidyl-peptidase II activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : tripeptidyl peptidase II protein_id : NP_033444.1

name	A530098C11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701484 CCDS:CCDS14927.1 GeneID:433294 MGI:3611450
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC433294 protein_id : NP_001013821.1

name	EG666713 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233810 GeneID:666713 MGI:3647616
definition	codon_start : 1 product : similar to hCG2011852 protein_id : XP_990666.2

name	1700029F09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878925 GeneID:75623 MGI:1922873
definition	codon_start : 1 product : hypothetical protein LOC75623 isoform 10 protein_id : XP_904875.1

name	1700029F09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878919 GeneID:75623 MGI:1922873
definition	codon_start : 1 product : hypothetical protein LOC75623 isoform 7 protein_id : XP_904852.1

name	1700029F09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878923 GeneID:75623 MGI:1922873
definition	codon_start : 1 product : hypothetical protein LOC75623 isoform 9 protein_id : XP_904867.1

name	Kdelc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963767 CCDS:CCDS14929.1 GeneID:72050 MGI:1919300
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 note : endoplasmic reticulum-resident KDEL protein; KDEL containing protein 1 product : KDEL (Lys-Asp-Glu-Leu) containing 1 protein_id : NP_076134.1

name	Bivm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328350 CCDS:CCDS14930.1 GeneID:246229 MGI:2179809
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : basic, immunoglobulin-like variable motif containing protein_id : NP_653141.2

name	Ercc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756023 GeneID:22592 MGI:103582
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA] GO_process : GO:0008340 - determination of adult life span [Evidence IMP]; GO:0006281 - DNA repair [Evidence IMP]; GO:0006289 - nucleotide-excision repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0009411 - response to UV [Evidence IMP] codon_start : 1 exception : mismatches in translation note : xeroderma pigmentosum, complementation group G; excision repair cross-complementing rodent repair deficiency,complementation group 5 product : excision repair cross-complementing rodent repair deficiency, complementation group 5 protein_id : NP_035859.1

name	4832428D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402315 CCDS:CCDS14931.1 GeneID:403183 MGI:2685837
definition	codon_start : 1 product : hypothetical protein LOC403183 protein_id : NP_997164.1

name	Gulp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311823 GeneID:70676 MGI:1920407
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006911 - phagocytosis, engulfment [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; CED 6 product : PTB domain adaptor protein CED-6 isoform 1 protein_id : NP_081782.1

name	Gulp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201936 GeneID:70676 MGI:1920407
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006911 - phagocytosis, engulfment [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; CED 6 product : PTB domain adaptor protein CED-6 isoform 2 protein_id : NP_082726.1

name	Col3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859526 GeneID:12825 MGI:88453
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : minisatellite 10w detected by probe MMS10 product : procollagen, type III, alpha 1 protein_id : NP_034060.1

name	Col5a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86613790 GeneID:12832 MGI:88458
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : procollagen, type V, alpha 2 protein_id : NP_031763.2

name	LOC666814 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233815 GeneID:666814
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_001477057.1

name	Wdr75 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83523742 CCDS:CCDS14932.1 GeneID:73674 MGI:1920924
definition	codon_start : 1 product : WD repeat domain 75 protein_id : NP_082875.1

name	EG433297 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363353 GeneID:433297 MGI:3643066
definition	codon_start : 1 product : similar to MYL6 protein protein_id : XP_484859.3

name	Slc40a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248585 CCDS:CCDS14933.1 GeneID:53945 MGI:1315204
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0005381 - iron ion transporter activity [Evidence IDA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IDA] codon_start : 1 note : ferroportin 1; solute carrier family 39 (iron-regulated transporter), member 1; solute carrier family 11 (proton-coupled divalent metal ion transporters), member 3; ferroportin1; metal transporting protein 1; polycythaemia; duodenal-specific product : solute carrier family 40 (iron-regulated transporter), member 1 protein_id : NP_058613.2

name	LOC435619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435619
definition	number : 2 pseudo : _no_value

name	LOC435619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435619
definition	number : 1 pseudo : _no_value

name	LOC100041738 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041738
definition	number : 1 pseudo : _no_value

name	LOC100041738 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041738
definition	number : 2 pseudo : _no_value

name	LOC100041752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041752
definition	number : 2 pseudo : _no_value

name	LOC100041752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041752
definition	number : 1 pseudo : _no_value

name	LOC383640 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383640
definition	number : 1 pseudo : _no_value

name	LOC383640 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383640
definition	number : 2 pseudo : _no_value

name	EG666799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666799
definition	number : 1 pseudo : _no_value

name	LOC631429 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631429
definition	number : 2 pseudo : _no_value

name	LOC631429 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:631429
definition	number : 1 pseudo : _no_value

name	EG666819 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666819
definition	number : 1 pseudo : _no_value

name	EG666819 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666819
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:125865
definition	standard_name : X81323

name	(CDS detail)
type	STS
link
xref	UniSTS:163248
definition	standard_name : X81323

name	(CDS detail)
type	STS
link
xref	UniSTS:218419
definition	standard_name : RH135142

name	(CDS detail)
type	STS
link
xref	UniSTS:234121
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:124781
definition	standard_name : D18409

name	(CDS detail)
type	STS
link
xref	UniSTS:164111
definition	standard_name : AI854267

name	(CDS detail)
type	STS
link
xref	UniSTS:144800
definition	standard_name : Ercc5

name	(CDS detail)
type	STS
link
xref	UniSTS:144799
definition	standard_name : Ercc5

name	(CDS detail)
type	STS
link
xref	UniSTS:178387
definition	standard_name : AI451477

name	(CDS detail)
type	STS
link
xref	UniSTS:119853
definition	standard_name : RH94605

name	(CDS detail)
type	STS
link
xref	UniSTS:179004
definition	standard_name : AW550880

name	(CDS detail)
type	STS
link
xref	UniSTS:234122
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:163022
definition	standard_name : RH126314

name	(CDS detail)
type	STS
link
xref	UniSTS:234005
definition	standard_name : Ms10w

name	(CDS detail)
type	STS
link
xref	UniSTS:155206
definition	standard_name : GDB:181238

name	(CDS detail)
type	STS
link
xref	UniSTS:472845
definition	standard_name : Col3a1

name	(CDS detail)
type	STS
link
xref	UniSTS:125805
definition	standard_name : X57983

name	(CDS detail)
type	STS
link
xref	UniSTS:178389
definition	standard_name : AW550625

name	(CDS detail)
type	STS
link
xref	UniSTS:207155
definition	standard_name : AW558340

name	(CDS detail)
type	STS
link
xref	UniSTS:116250
definition	standard_name : D1Mit236

name	(CDS detail)
type	STS
link
xref	UniSTS:124149
definition	standard_name : 35.MMHAP59FRD11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:160001
definition	standard_name : L21221

name	(CDS detail)
type	STS
link
xref	UniSTS:128580
definition	standard_name : D1Mit235

name	(CDS detail)
type	STS
link
xref	UniSTS:162902
definition	standard_name : RH126194

name	(CDS detail)
type	STS
link
xref	UniSTS:128579
definition	standard_name : D1Mit234.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128578
definition	standard_name : D1Mit234

name	(CDS detail)
type	STS
link
xref	UniSTS:207156
definition	standard_name : BB284629

name	(CDS detail)
type	STS
link
xref	UniSTS:234123
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:496015
definition	standard_name : Slc40a1

name	Txn-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	pseudo : _no_value

name	LOC383644 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233816 GeneID:383644
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to hCG1984888 pseudo : _no_value transcript_id : XR_033039.1

clone name	MSMg01-065A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-128G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-143O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194O01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-384F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055G02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-327G10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-512G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-486P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436B13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-328D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118E14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-068O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-366O14.T7 (MSMg01no366_o14.b1)	MSMg01-366O14.TJ (MSMg01no366_o14.g1)
ACC	AG474510	AG474511
length	790	774
length of high quality (start - end)	307 (75 - 381)	236 (79 - 314)
definition	CHROMAT_FILE: MSMg01no366_o14.b1 PHD_FILE: MSMg01no366_o14.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:03:53 2005	CHROMAT_FILE: MSMg01no366_o14.g1 PHD_FILE: MSMg01no366_o14.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:03:53 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	ACATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAATCCGC GGAATTCAAATCTGTTTCTACAATTTATATAATTTAAGCTGAACAATGTT GGCCTGCTGAAGAATGAATTTAGTTATGTGCTACTTGAAGAAAATAATAA TTCTGTCTATCCAACAATTCCTTCCAAAATTGCAACAAAACAACATAAAA TTCTCAACATTAGAGAACTATTTTAATTTTCAAATTGTTTGTTGAATCCT AATGTGATTCAGGTAGAATTATCTAACATGGAAAAATTCATATTCACTTC TGTACTTTGAAATACTTCTGCTTTATTTTTAAAATTTACATAATTGTTGT TGTTGTTGGTGGTGGTGTGTGTATGTGTGTGTNNCCCCCCCCCCCNCCNT NTNCNCCCTTTTTTCCCCCCCCCCTTCCNTTTTTTTTCCTTCTCTTCCTC CCCTTTTCCTCCTCTTTCCTCTTTTTTTTCTCCCCCTTCTTTTTTTTTTT TCTTTCTCTTTTTCTCTTTTTCTTTCCCTTTTTTTTTCCCCTCCTTCTTT CTTCTTTTCCCTTCTTTTTTTTTTTTTCCTCTTTTTCCCTTTCTCTTTCT CCCTTTTTTTCTTTTTTCCCTTCCCTCTTTTCTTCTCTCCTTTTTCCCCC CCCCTTTCTCTTCCTTTTTTTTTTCCTCTCCTCCCCCCCCTTTTCCCCTT TTTTCCTTTCTTCCTCTTCCCCTTTTCTTTCCTTTCCCTCTTTTTCCCTT TCCCTTCTTTTCCTTTTTTTCTCCCTTTTCTCCTTTTTTT	CCCGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXCTCATCTTTCCAAGNTTTTTAGC ATGAAGGGGTGTTGTATTTTGTCACCGACTTTTTCTGTATCTAATGAGAA GATCATGTGTTTTTTTTTTTTCTTTAAGTTTGTTTGTATAGTGGATATTT ATGGATTTCCATGTACTGAACCATCCCTGCATCCTTGGGATGAAGCCTAT TTGTTTTTTGTGAATGATCCTTTTGATGTATTCTTAGATTCAGTTTGTGA GAATTTTATTGAGCATCTTTGTACTGACATTCANAAGGAAAANTGGNTAG AAGAACCCATTCTTTTTTGCCCCCCTGCGCGGTTTAGGTATTAGAGTTTT TATGTCCCCATAGATTTCCCCCCCCTGTGTTCTTTTTATCCCTATGCTAT TTTTGTAAATCCCCGCCTTCATGTGTCCTTTGACCGTTTGTTCTTTTTCC TTGAACTTTTACCCCCTTTTTTTTTTTTTCGCCTTTCTGCCCGTTCTTTT TTTCTTTTTCTGTCTTTTCATCTTTTAATTTTTTTCCATTCATCTCTTCC TTTCTCCCTCCCCTTCATCCTTTTTTTTTTTCACGCCCGTTTCCCCATCT CCTTCTATATATCTATTTTTTTTTTTTTTTTTCTCATATATATATCTCTT ACTCTTTCCTTTCATCGCTTTTGCTAATATCAACCTCCTCTTTAATTTCT CCTCTGTTCCTTCCCCCTCCCTCC
quality values	Open. Hide. 9 9 9 9 8 8 8 11 8 10 11 23 23 29 27 24 22 22 32 22 23 20 20 18 24 34 44 26 17 17 16 17 21 21 11 8 11 11 8 7 7 8 8 8 9 9 12 18 18 30 30 22 19 17 18 19 23 22 25 25 23 19 9 9 6 8 8 6 8 8 10 12 10 10 13 18 28 34 41 41 59 48 50 53 53 57 57 57 59 59 57 42 42 50 50 50 47 57 57 57 57 57 68 68 68 68 68 68 68 68 68 42 50 50 50 50 50 50 50 50 42 36 28 23 22 36 38 42 57 57 57 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 50 51 51 46 46 46 50 57 68 68 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 46 47 43 43 44 44 44 44 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 57 57 57 57 57 57 59 59 57 53 53 50 50 50 59 59 59 37 36 14 8 8 6 7 7 8 9 19 30 44 41 47 47 50 50 50 53 53 57 57 57 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 57 57 43 43 36 37 37 39 35 39 33 37 34 34 37 37 34 23 22 3 0 0 3 7 7 7 8 9 10 10 10 10 3 0 3 3 0 3 0 3 0 3 0 3 9 13 14 18 21 18 22 11 10 10 12 16 19 18 31 27 19 18 12 11 10 3 0 3 7 7 8 8 8 8 9 13 10 13 11 10 10 10 10 13 13 11 9 9 9 9 9 12 8 8 8 8 13 8 8 8 8 8 8 8 10 10 8 8 8 8 17 19 22 17 14 10 10 8 8 8 11 8 8 8 8 8 8 9 9 12 10 10 13 18 18 18 9 8 8 8 10 10 10 10 9 10 10 18 18 11 9 9 7 7 8 10 10 10 8 10 10 10 10 9 9 9 9 12 12 18 19 15 13 8 8 8 8 10 10 10 10 9 10 10 10 8 10 8 9 9 8 12 10 8 8 8 9 14 9 9 9 9 10 8 12 12 13 24 20 15 13 10 10 9 9 9 8 8 8 8 19 19 15 15 9 10 12 15 11 9 8 10 8 8 7 8 7 7 6 6 8 10 8 10 10 10 8 8 8 8 8 11 8 9 8 8 9 8 8 8 9 8 8 9 9 9 15 11 10 8 8 8 8 8 8 8 8 6 6 8 7 11 15 10 10 12 20 20 23 28 28 37 27 39 32 25 25 17 17 13 18 15 16 18 26 26 25 24 12 18 15 11 11 10 8 8 8 10 8 8 11 11 11 16 16 14 13 9 9 9 17 9 9 10 8 9 10 9 9 8 8 7 7 10 15 15 12 12 12 12 12 9 9 9 10 13 12 8 8 8 8 8 8 8 8 8 12 8 8 8 8 10 10 10 13 10 10 9 8 8 8 16 16 9 9 10 10 11 10 14 13 9 9 8 8 8 9 9 10 15 18 9 9 9 23 16 12 12 10 10 10 10 19 19 22 17 9 9 9 12 12 15 26 27 43 35 31 25	Open. Hide. 6 6 6 6 6 8 12 9 10 9 8 7 7 9 7 12 10 17 11 13 11 9 7 9 7 7 3 0 3 23 18 16 21 9 9 9 8 6 6 3 0 3 6 6 6 9 12 18 3 0 3 19 17 30 21 21 3 0 3 25 25 9 9 9 6 8 8 6 6 6 7 7 9 12 11 12 11 16 17 19 30 30 41 46 50 28 25 25 17 15 3 0 3 29 27 39 41 42 50 50 50 50 53 50 57 57 59 59 48 48 57 59 59 59 59 59 59 28 34 28 18 17 15 10 9 9 10 10 23 32 41 59 59 50 50 50 50 50 50 57 57 57 53 50 50 50 50 57 59 27 24 14 21 17 26 35 68 68 68 68 68 68 68 68 68 68 68 59 59 57 54 48 48 47 46 43 43 43 57 57 59 54 59 57 57 57 57 57 57 57 40 43 39 43 43 48 48 57 57 57 57 57 54 54 54 57 57 68 54 54 54 54 54 57 57 57 57 50 48 53 50 54 54 54 59 59 57 48 48 48 48 48 48 57 57 57 57 50 48 48 50 48 48 48 48 40 40 40 41 27 25 11 11 11 16 19 16 16 12 13 13 28 28 47 47 47 48 48 48 48 57 57 48 48 48 43 43 43 40 47 47 47 50 44 43 33 33 21 28 24 14 14 26 28 43 43 48 39 39 35 32 35 35 35 35 35 35 43 43 43 28 25 12 12 13 11 11 11 9 10 8 7 7 7 11 17 9 9 9 19 19 20 3 0 3 18 18 28 32 22 22 3 0 3 23 3 0 3 11 11 21 21 8 8 8 7 7 7 9 9 21 23 37 41 59 59 32 26 17 13 11 11 13 12 12 12 9 12 11 11 11 15 15 28 28 28 25 24 24 24 20 23 12 11 11 11 11 13 11 11 10 10 10 10 9 10 10 19 10 11 12 9 9 9 10 15 10 9 9 14 16 21 13 17 8 8 8 8 13 15 15 9 9 10 12 19 15 21 22 28 21 19 12 11 11 13 10 10 16 16 18 15 19 11 11 9 9 9 10 13 9 9 12 10 14 14 16 15 10 10 10 10 10 8 8 8 8 8 8 13 8 8 8 8 8 8 8 10 11 11 11 11 11 13 15 11 11 10 8 8 8 8 8 10 10 11 10 8 8 7 7 8 8 12 10 9 9 10 10 10 10 19 13 10 10 10 10 8 8 8 6 6 8 10 10 12 10 10 9 10 10 8 8 8 8 8 9 15 15 14 13 10 10 10 8 10 10 12 14 10 8 7 7 10 10 12 16 13 8 8 8 8 8 9 12 6 6 7 7 12 10 9 8 8 8 13 8 8 8 8 8 8 10 10 11 11 11 11 11 11 9 9 10 10 13 11 11 11 11 10 10 9 8 10 8 8 6 6 8 8 12 10 8 10 9 9 9 11 11 13 12 8 7 6 8 8 9 9 9 11 16 18 23 18 17 11 11 8 8 10 15 18 20 15 15 8 8 8 10 8 8 8 13 9 11 11 15 17 24 25 24 31 37 37 37 37 41 18 16 15 8 8 8 10 8 8 9 9 9 9 8 11 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 12 12 20 12 11 9 10 10 10 10 12 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 11 8 8 8 8 8 10 13 8 9 8 8 14 9 9 9 8 8 6 6 6 6 8 10 10 10 10 15 13 14 10 11 19 19 19 9 10 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no366_o14.b1 MSMg01no366_o14.b1 CHROMAT_FILE:
MSMg01no366_o14.b1 PHD_FILE: MSMg01no366_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:53 2005
         (307 letters)



>mm_chr1_45001644_45002350
          Length = 707

 Score =  563 bits (291), Expect = e-165
 Identities = 303/307 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttatataatttaagctgaacaatgttggcctgctgaagaatgaatttagttatgtgctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatataatttaagctgaacaatgttggcctgctgaagaatgaatttagttatgtgctac 260

                                                                       
Query: 61  ttgaagaaaataataattctgtctatccaacaattccttccaaaattgcaacaaaacaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaagaaaataataattctgtctatccaacaattccttccaaaattgcaacaaaacaac 320

                                                                       
Query: 121 ataaaattctcaacattagagaactattttaattttcaaattgtttgttgaatcctaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ataaaattctcaacattagagaactattttaattttcaaattgtttgttgaatcctattg 380

                                                                       
Query: 181 tgattcaggtagaattatctaacatggaaaaattcatattcacttctgtactttgaaata 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tgattcaggtagaattatctaacatgcaaaaattcatattcacttctgtactttgaaata 440

                                                                       
Query: 241 cttctgctttatttttaaaatttacataattgttgttgttgttggtggtggtgtgtgtat 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgctttattttttaaatttacataattgttgttgttgttggtggtggtgtgtgtat 500

                  
Query: 301 gtgtgtg 307
            ||||||
Sbjct: 501 atgtgtg 507


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space:   208004
Effective search space used:   208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information