Query= MSMg01no367_g12.b1 MSMg01no367_g12.b1 CHROMAT_FILE:
MSMg01no367_g12.b1 PHD_FILE: MSMg01no367_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:33 2005
(429 letters)
>mm_chr1_147301466_147302294
Length = 829
Score = 810 bits (419), Expect = 0.0
Identities = 425/427 (99%)
Strand = Plus / Plus
Query: 1 cctatttttattgtgttttttgattttcaaaatggtcaactgaaacttttgtacattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctatttttattgtgttttttgattttcaaaatggtcaactgaaacttttgtacattttc 260
Query: 61 ttggatcaaataataagctgaagagaagatatctgcatttactaatgtgatgatttaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggatcaaataataagctgaagagaagatatctgcatttactaatgtgatgatttaaat 320
Query: 121 atacaaagtactatcacatttaacaataagtagattcatattaaggcatattttagacca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 atacaaagtactatcacatttaacaataagtagattcatattaaggtatattttagacca 380
Query: 181 ttaatttaatattttattttgtagtagcatcttgcatcatgatgctaagatttctactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaatttaatattttattttgtagtagcatcttgcatcatgatgctaagatttctactga 440
Query: 241 ttccagttttccattttctagtgatttttcttagattgctataaatgaaaccacttacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccagttttccattttctagtgatttttcttagattgctataaatgaaaccacttacta 500
Query: 301 atctatatttactgcttattttccattatgttaaattaaatattgcatcaggattaacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctatatttactgcttattttccattatgttaaattaaatattgcatcaggattaacat 560
Query: 361 aagaataagatgctaaacgtctcaatgcatgtatagcatatttaattttactgcactaac 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaataaaatgctaaacgtctcaatgcatgtatagcatatttaattttactgcactaac 620
Query: 421 tgttaag 427
|||||||
Sbjct: 621 tgttaag 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_g12.g1 MSMg01no367_g12.g1 CHROMAT_FILE:
MSMg01no367_g12.g1 PHD_FILE: MSMg01no367_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:33 2005
(451 letters)
>mm_chr1_147433016_147433866
Length = 851
Score = 762 bits (394), Expect = 0.0
Identities = 430/452 (95%), Gaps = 17/452 (3%)
Strand = Plus / Minus
Query: 1 tccattggagtccctgtgctcactcagcctgatggatggctgtggattggaaaagttctt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 593 tccattggagtccctgtgctcactcagcctgatggatggctgtgaattggaaaagttctt 534
Query: 61 tactaattctacatctgataggggactaatatccaatatgtacaaaaaactcaagaagtt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 533 tactaattctacatctgataggggactaatatccaatatgtacaaagaactcaagaagtt 474
Query: 121 acacgtcagagggggaaaagtgtatgttttacattactaagaagtaatgataaaattaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 473 acacgtcagagggggaaaagtgtatgttttacattactaagaagtaatgataaaagtaag 414
Query: 181 atgtataactccttcagaacaataatatattaattatcccataaagattcattatgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgtataactccttcagaacaataatatattaattatcccataaagattcattatgtttt 354
Query: 241 tgtaatagaatcaacttaagttttgttatttatttatttatttatttatttatttattta 300
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 353 tgtaatagaatcaacttaagttttg----------------ttatttatttatttattta 310
Query: 301 tttatgatatt-aaaaaataatcaatcactatggaatacatattggggaccatctgtgtt 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tttatgatattaaaaaaataatcaatcactatggaatacatattggggaccatctgtgtt 250
Query: 360 tctgcatcttttaattcctatctcatggtttctggaatgatgaagttgagtctggaacag 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 249 tctgcatcttttaattcctatctcatggtttctggaatgataaagttgagtctggaacag 190
Query: 420 gtgagatctgcagggtcggggtctgtctggga 451
||||||||||||||| ||||||||||||||||
Sbjct: 189 gtgagatctgcaggggcggggtctgtctggga 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
