NAATTATTACTCGTGTCGCTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAACATTGCAGTATCTAATGGCTGAGAAAGAGACTTAAAGAAA
TGTTCAATGTCCTTAGTCATCAGAAAAATGCAAATTGAAATGATTCTGAG
ATTCTACCTTACCTCTATCAAAATGGCTGAGATCAAACTTCAAGTAAAAG
CACACACTAAGGAGAGTGTGGAGCATGAGAAGCACTTCTTCATTGCTGGA
TGGGAGTGCAAGTCTGTACAGCCACTCTGGAAATCAATTTTGTGGCGTCT
CATAAAACTTGGAATAGTTCTACCCCAAGACCCAGCTATACCACTCCTAG
GCATATACCCAAAAGATGCTCCAGAACACTACAAGGACACTTGTTCCTCT
ATGAACATAGCAGCTTTATTTGTAGTAGACAGAAACTGGAAACAATCTAG
ATATCTCTCTGGAAAAGAATGAATAAAGAAAACTTGACTCATCTACACAA
TGAAATACTACTCAGCTATTAAAAAACAAGGACATCATGAAATTTGCAGG
CAAATGATGTAACTAGAAAATATTATCCTGGGTGAGGAAACTCAGACACA
AGAAGACATGCATGGTATGCACTCCACCAACTTTTAATCCCTATGTGGAT
AAATCAGTTACCACCTCTATAGCCCAGACTCTTAACTTAGAAAATGTTTT
ATGCCGGTTAAAATTGAAGGAAACATCTTACTGAAAAATGTGAAAATGTT
TTGAGAAAATATTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA
GGTCCATGTGTGAATGTAAGCAAAAAATGATGCATAAATATCAGACATAA
CATTTGAGAATAGGTCATTAATAAAACAAACAAAAAACCCAAAACACTAG
CAGAACAACAACAACAAAAACAAACATGGTCTCTCTCTAGCTTTACATTT
TTCTAGAAAACCCAATATCTTTCCCAGCAGGACATACACAAACCTGTGAA
AGAATCTAGGTAGTGACAAATAAGGTCTTCTCTCTTACCAGCTGGTAATA
CACAAAGCCATTTGTCATCAGGTGCAAGATCAACCACTTATGAAGAAGAA
CCATCTACTATCTTCCATTCCTTCAGTTGTATGGAGCCAGCCAGCCACTT
ATAGAAAGTTATCTCACATAAACAGAAAATGAAACACCCACTAAACTGTT
CTTTGAATCCCAATGGTAATGTACAGAAACAATGTANAATAGGTTTAATT
TGTTAGTCATCAGTAGGCTACTAGGATCAAATGTTAATCAATAGTAGGGG
GAATGGGTTTTGACATCAGTAAGTAGCTAATATATGTATGTTTAGGGGGT
ATTTTTGCACCCTCCAATTTTATGTAAATAGAAAATAGGATTTCCGGGTA
AGATTATTCCAAAAAGCTGGGGAGAAGGGTGAGGAATAAAAAGGGCACCG
GCTTGGGAAAAAAAAAAAGCCCCTTTCCTGATTGGGGGGCACCCACCCTT
T

Query= MSMg01no367_i20.g1 MSMg01no367_i20.g1 CHROMAT_FILE:
MSMg01no367_i20.g1 PHD_FILE: MSMg01no367_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:45 2005
         (437 letters)



>mm_chr1_142580831_142581667
          Length = 837

 Score =  816 bits (422), Expect = 0.0
 Identities = 436/446 (97%), Gaps = 9/446 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtccatgtgtgaatgtaagcaaaaaatgatgcataaatatcagacataacatttgaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aggtccatgtgtgaatgtaagcaaaaaatgatgcataaatatcagacataacatttgaga 691

                                                                       
Query: 61  ataggtcattaataaaacaaacaaaaaacccaaaacactagcag---------aacaaca 111
           ||||||||||||||||||||||||||||||||||||||||||||         |||||||
Sbjct: 690 ataggtcattaataaaacaaacaaaaaacccaaaacactagcagaacaacaacaacaaca 631

                                                                       
Query: 112 acaacaaaaacaaacatggtctctctctagctttacatttttctagaaaacccaatatct 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 acaacaaaaacaaacatggtctctctctagctttacatttttctagaaaacccaatatct 571

                                                                       
Query: 172 ttcccagcaggacatacacaaacctgtgaaagaatctaggtagtgacaaataaggtcttc 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttcccagcaggacatacacaaacctgtgaaagaatctaggtagtgacaaataaggtcttc 511

                                                                       
Query: 232 tctcttaccagctggtaatacacaaagccatttgtcatcaggtgcaagatcaaccactta 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tctcttaccagctggtaatacacaaagccatttgtcatcaggtgcaagatcaaccactta 451

                                                                       
Query: 292 tgaagaagaaccatctactatcttccattccttcagttgtatggagccagccagccactt 351
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgaagaagaaccatctgctatcttccattccttcagttgtatggagccagccagccactt 391

                                                                       
Query: 352 atagaaagttatctcacataaacagaaaatgaaacacccactaaactgttctttgaatcc 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atagaaagttatctcacataaacagaaaatgaaacacccactaaactgttctttgaatcc 331

                                     
Query: 412 caatggtaatgtacagaaacaatgta 437
           ||||||||||||||||||||||||||
Sbjct: 330 caatggtaatgtacagaaacaatgta 305


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)