NGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCCTGTGTGTGACATTAGGACCAAGAACATTGTGCGAGCCTTTT
CACTAAGTAGAACACAGTAATGGTTTTGATCTTATATTCTTAGCTCTTAA
GAATTCAAGGATCTATTTTGTTAATTTGAAAGATTGAAATTACAGAGTGA
TTTGTTCAAGATAAAAGCCTGACCACCTGACCATCTACAGCATACTAGAG
AGCCACTTTGCTCAGACATGAATATTTTCTGTAAAGATTTTTATTTGTGA
TCTTACAGCATCTGTGAGTTTTGTAGGAAGATGACCCTTATACATTTTTG
ACTTTTATACTCAAATGACCTTTTGAATGACCACTATGTTTGTTAGCAAG
GAATGAGAATCACTCTAGAACACAACTCAAAGACTATTGAATTAACTGTG
TATGAAAATAAGTTGTGTGAGGCAGGGGATGGGTGAGGAGGGAAGGCGAT
TTCGCTTTCTTCCTTCTTTTCTCTTTTTTCTCTTCATTCTTTACGACACC
TTTCCTCTCCTTCTTCTTCCCTTCTCCCTTTTTCTCTTTGCCTCCTCCCT
TTTCTTCCCTTTTCCTTCCTCCTCCTTTTTCCTCCCTCTCCTTCCCTTTC
CCTCCTTTTCCCTTCTTTTTTTTTCTTCCTTTCTTTTCCCCCTTCCCTTT
TTCCTTCTTTCCCCACTTCCTTTCCTTCTCTTTTCTTTCTCCCCCCTCTC
CTCCCTTCCCTTTTTTACCTTTTTTTCCCCCTATTTTCCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAGCCAGGGCTACATAGAGA
AACTCTGTCTCATATATGTATACACACACACACACACACACACACACACA
CACACACACACACACACACACACACGTATATATATATATATATATATATA
TATAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGAATATTCTAATACAA
TACAAGACAAAGGTAGAATAATTTGATGTTTACATAAGTAATGATGGTAG
GAATTTAAAATTTTTTACATGAAATTAACCTATATATTTCAATGAGAAAT
TTTTCTTTATATGTACAGGAAAAATACTGCAGTATTAGTGTGTGTATGAG
TGTGAGTGTATGAGCGCGCGGTCTCACTTATGCCACAGTGTGCATGTGTC
ATCCTTAATTGTCTAATTCATTGTTGAGTTTTTTGGTCCTCTGCTCGATG
GTTCGCATTTCCCTCCCTGTTGCCCTCGCAACTTTCTGTTTCGTTCTCCA
CTCCTATTTTTTTCCGACTGTTATCCTCTCTCTCCTTCTACCTACCCCTT
TTCCGTGCTCACATTCCCGGCGCTTCCCCCATATATAATCCTCCCTCCCC
CGCTATTTCTACTCTATGGTGCCCCCTTTTTTCTTCCCCGTTTCTCTCCC
CTTATCCGCCCTTCCCTTCCCCCCCCAGTACATTTCCGCCCTTTTCATCT
TCTTCTTATCCCCCTCCCACTTTCCTTTTCTTTACATCC

Query= MSMg01no367_p20.b1 MSMg01no367_p20.b1 CHROMAT_FILE:
MSMg01no367_p20.b1 PHD_FILE: MSMg01no367_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:18 2005
         (452 letters)



>mm_chr1_16362635_16363486
          Length = 852

 Score =  855 bits (442), Expect = 0.0
 Identities = 445/446 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcctgtgtgtgacattaggaccaagaacattgtgcgagccttttcactaagtag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gaattctcctgtgtgtgacattaggaccaagaacattgtgcgagccttttcactaagtag 591

                                                                       
Query: 65  aacacagtaatggttttgatcttatattcttagctcttaagaattcaaggatctattttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aacacagtaatggttttgatcttatattcttagctcttaagaattcaaggatctattttg 531

                                                                       
Query: 125 ttaatttgaaagattgaaattacagagtgatttgttcaagataaaagcctgaccacctga 184
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttaatttgaaaggttgaaattacagagtgatttgttcaagataaaagcctgaccacctga 471

                                                                       
Query: 185 ccatctacagcatactagagagccactttgctcagacatgaatattttctgtaaagattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccatctacagcatactagagagccactttgctcagacatgaatattttctgtaaagattt 411

                                                                       
Query: 245 ttatttgtgatcttacagcatctgtgagttttgtaggaagatgacccttatacatttttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttatttgtgatcttacagcatctgtgagttttgtaggaagatgacccttatacatttttg 351

                                                                       
Query: 305 acttttatactcaaatgaccttttgaatgaccactatgtttgttagcaaggaatgagaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acttttatactcaaatgaccttttgaatgaccactatgtttgttagcaaggaatgagaat 291

                                                                       
Query: 365 cactctagaacacaactcaaagactattgaattaactgtgtatgaaaataagttgtgtga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cactctagaacacaactcaaagactattgaattaactgtgtatgaaaataagttgtgtga 231

                                     
Query: 425 ggcaggggatgggtgaggagggaagg 450
           ||||||||||||||||||||||||||
Sbjct: 230 ggcaggggatgggtgaggagggaagg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)