Query= MSMg01no368_c10.b1 MSMg01no368_c10.b1 CHROMAT_FILE:
MSMg01no368_c10.b1 PHD_FILE: MSMg01no368_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:31 2005
(548 letters)
>mm_chr1_67413180_67414127
Length = 948
Score = 1038 bits (537), Expect = 0.0
Identities = 543/545 (99%), Gaps = 1/545 (0%)
Strand = Plus / Minus
Query: 5 gaattcc-atcactattcttcttctccctctccctttctctctctttcccttcccaactt 63
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gaattccaatcacaattcttcttctccctctccctttctctctctttcccttcccaactt 786
Query: 64 gggtatgtatgtatgtgtgtgtctgtgtgtctgtgtgctatgtctctgtgtctctgtatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gggtatgtatgtatgtgtgtgtctgtgtgtctgtgtgctatgtctctgtgtctctgtatg 726
Query: 124 tctgtatttaacactgtagggtgtttaaccttttattatacacattcttttccccaaatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tctgtatttaacactgtagggtgtttaaccttttattatacacattcttttccccaaatc 666
Query: 184 ctgccccatacctccaaaacacacccaactacaaacttcaagataggcatgcagcattca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgccccatacctccaaaacacacccaactacaaacttcaagataggcatgcagcattca 606
Query: 244 agactgagaaagctaaagaaataaatactagttagcttttccaaaacgtaaacttcaaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agactgagaaagctaaagaaataaatactagttagcttttccaaaacgtaaacttcaaca 546
Query: 304 cactggagtatttcctcaacagaaactatttgatggtgggaataatttcttaaaaggctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cactggagtatttcctcaacagaaactatttgatggtgggaataatttcttaaaaggctt 486
Query: 364 cataacaaaattaccctgggcattatgagattgataagccagatattatagcatcagtca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cataacaaaattaccctgggcattatgagattgataagccagatattatagcatcagtca 426
Query: 424 aaattcattcttttaatgaaaaaaatgtgattacttacataataataaaacgtatttatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaattcattcttttaatgaaaaaaatgtgattacttacataataataaaacgtatttatt 366
Query: 484 tggtttatgaacaaatatgctcatgtgtccattgaagagaatttttttgacattttactc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tggtttatgaacaaatatgctcatgtgtccattgaagagaatttttttgacattttactc 306
Query: 544 tttcc 548
|||||
Sbjct: 305 tttcc 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_c10.g1 MSMg01no368_c10.g1 CHROMAT_FILE:
MSMg01no368_c10.g1 PHD_FILE: MSMg01no368_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:31 2005
(515 letters)
>mm_chr1_67225250_67226164
Length = 915
Score = 996 bits (515), Expect = 0.0
Identities = 515/515 (100%)
Strand = Plus / Plus
Query: 1 ttatttcaggatgactgggtcaccacctcttttgatttggggagaatgcaggcattagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatttcaggatgactgggtcaccacctcttttgatttggggagaatgcaggcattagtt 260
Query: 61 tttatttggagaacatttcaccagcctcaaatgtgtttggggtcataatggacttcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatttggagaacatttcaccagcctcaaatgtgtttggggtcataatggacttcattc 320
Query: 121 cagtgggagccagacagagtagttacagtgtgaggagttgatgtctcaggagtggcaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtgggagccagacagagtagttacagtgtgaggagttgatgtctcaggagtggcaggc 380
Query: 181 ttgctttacaatggaagcaggcctgactgtaggttcttcgtcctctcagggaaatggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctttacaatggaagcaggcctgactgtaggttcttcgtcctctcagggaaatggcta 440
Query: 241 ccagattctgggcccttgttcattttacatcatcagatgcaatctttatttaatctgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagattctgggcccttgttcattttacatcatcagatgcaatctttatttaatctgtag 500
Query: 301 aaagcatgaataacttattttctatgtaccttctattgttaatgcctggcagcttttagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagcatgaataacttattttctatgtaccttctattgttaatgcctggcagcttttagt 560
Query: 361 ctcttagggactaagaccaatgtagattttgtagacaagaccgtgattttgtgaagagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcttagggactaagaccaatgtagattttgtagacaagaccgtgattttgtgaagagtt 620
Query: 421 acataagagtaatacaaagttaaaaagcaaacatggctttgagtgttttcataaagtgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acataagagtaatacaaagttaaaaagcaaacatggctttgagtgttttcataaagtgtt 680
Query: 481 attctagtcaagtgaactgtgaaccatgctatagc 515
|||||||||||||||||||||||||||||||||||
Sbjct: 681 attctagtcaagtgaactgtgaaccatgctatagc 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
