ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCAGGCAATTACCCGAGAGGATCTTATACCCACACCCACAGTGACACA
CCCATTCCAACCAGGTCACACCTATTCCAACAAGGCCATACCTCCAGATG
GTGCCACTCCCTAGTCCAAGGATATACAAACCATCACAAGCAGGTAGAGG
CTAAAGATTCTTCTTGAATGGTCTACAGTGCACAAGAAAGAAGTATTCAT
CACCAATTGTCAACAGTGCTGACACTGACCCGCACTCTCAGGATGACTGG
AAAACATGTTACCTTTAAACTAATCTAAGGAAGCAGAAGGGACAGCTTTG
AAGTAAGTATGGTGAATTATGCTCTGTTCACGTTGTTTTATGAACACCAA
AAAGGGATTAAATTCAGAATATTATCAAGAATATGAAAATCGCATATATT
TATAAGCCCATCTATCTGTTGGCTGCAGCAGTAGAGAAGCCCGTCTTGGA
TTCTGAACCACGCCTGAACACAAATCTTGGCTCAAAACTTGTCTGCCTTG
TGTACTATGGAAGCACTTTTAGTAGATATACTAAATTCTCTCATCTTTGG
CTCCCTCAGCACAGTANAATCATTGTCATGCAGCATTAGTATTAAATGTA
ATGCCTATAAAAATTCAGTACAGTATTCCAAAATACCCTTTCCCTTAACT
GATTGTGAATCAATAAAAATTTTTCCCAATAATAACTTATGGTGTCTAGA
GGGG

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGTGCTGTGATTTGAAGAGTGAATATGATTTCAG
TATTAGTAGAGGAGGGAAGGAATGTGGTGTAAAGGCAGGCTATACTTCCC
ATAGCAACAGGAAGTGTCCCAGGAAGCTGCAGATTAAATTCACCCCCCTG
CCTGAGCAGGGATCTTGGGAAGTCAAGTGCTTGTCTCGAAAGTTCGCATA
CCCGAGTCTCAGTCTGCCATTCCTGTAATCCCAGCCCTGAAGGCAGAGAC
AGGAAGATCCTGGATTTCTTTGGCTCACCAGTCTAGCTAACTAGTGAGCT
CCGATGTCAGTAGAACCCCATCGGTCTCTAAAACAGTGAGCACTAAAGAA
AGATCTGCGCCGCTGAGCTCTACCCTCCACTCTCCCTGGAAGGCAGGAAG
CACAGCATGCGGATGTGAGCCGCATACTTCTGCTCTGAATCAGTTTCTTG
CTGCCTATGGCAGCTCTGAGTGTCTTAACTCTCCATCCTCAGACCAGTGT
AAACTGACTTTTGGCAAACTGGTAAAAGTTATAACAATGCCCTAGCGTTG
TACCGAGTTGATTACAGATTTCACAGGGCCTCACTGGTAAGATGGCTTGC
TTATATAGCGACTATTTTTTATTTCTGTAATCTTGGCCACCTAACTACAA
TCACAGTTTTGTTCTCGCGTAATTTTCTCATACAACATCTTTTCAACATC
GATATCTTTTTTCTCTCTTTCTTN

Query= MSMg01no368_k08.b1 MSMg01no368_k08.b1 CHROMAT_FILE:
MSMg01no368_k08.b1 PHD_FILE: MSMg01no368_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:08 2005
         (547 letters)



>mm_chr1_187426628_187427574
          Length = 947

 Score =  719 bits (372), Expect = 0.0
 Identities = 414/428 (96%)
 Strand = Plus / Minus

                                                                       
Query: 117 agcaggtagaggctaaagattcttcttgaatggtctacagtgcacaagaaagaagtattc 176
           |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 834 agcaggtagaggttaaagattcttctcgaatggtctacagtgcacaagaaagaagtattc 775

                                                                       
Query: 177 atcaccaattgtcaacagtgctgacactgacccgcactctcaggatgactggaaaacatg 236
           ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 774 atcaccagttgtcaacagtgctgagactgacccgcactctcgggatgactggaaaacatg 715

                                                                       
Query: 237 ttacctttaaactaatctaaggaagcagaagggacagctttgaagtaagtatggtgaatt 296
           ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 714 ttacctttaaactaagctaaggaagcagaagggacagctttgaagtaagtatagtgaatt 655

                                                                       
Query: 297 atgctctgttcacgttgttttatgaacaccaaaaagggattaaattcagaatattatcaa 356
            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ctgctctgttcacgtcgttttatgaacaccaaaaagggattaaattcagaatattatcaa 595

                                                                       
Query: 357 gaatatgaaaatcgcatatatttataagcccatctatctgttggctgcagcagtagagaa 416
           |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 594 gaatatgaaagtcgtatatatttataagcccatctatctgttgactgcagcagtagagaa 535

                                                                       
Query: 417 gcccgtcttggattctgaaccacgcctgaacacaaatcttggctcaaaacttgtctgcct 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gcccgtcttggattctgaaccacgcctgaacacaaatcttggctcaaaacttgtctgcct 475

                                                                       
Query: 477 tgtgtactatggaagcacttttagtagatatactaaattctctcatctttggctccctca 536
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cgtgtgctatggaagcacttttagtagatatactaaattctctcatctttggctccctca 415

                   
Query: 537 gcacagta 544
           ||||||||
Sbjct: 414 gcacagta 407


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)