Query= MSMg01no370_e15.b1 MSMg01no370_e15.b1 CHROMAT_FILE:
MSMg01no370_e15.b1 PHD_FILE: MSMg01no370_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:17 2005
(398 letters)
>mm_chr1_154297687_154298484
Length = 798
Score = 652 bits (337), Expect = 0.0
Identities = 366/379 (96%), Gaps = 8/379 (2%)
Strand = Plus / Plus
Query: 21 tctgggtctgagtctggcatacaatgaatgttcaagctggtcttctctgtgtttcccttt 80
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tctgggtctgggtctggcatacaatgaatgttcaagctggtcttctctgtgtttcccttt 280
Query: 81 gcagaagacagcaagtcctaatgacagtcaaagaatttatgaactgtgtgtttgtgcaaa 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gcagaagacagcaagtcctaatgacagtcaaagaatttatgaactgtgtgtttgtgcaaa 340
Query: 141 cacaaacacacatgcacatgcacacgcacacacacaactttacacagacacccaacctct 200
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 341 cacaaaca------cacatgcacacgcacacatacaactttacacagacacccaacctct 394
Query: 201 gaaaaacttctaggagtacacagtgttcctttcctctgacatgaattttccaaaataggg 260
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 395 gaaaaacttctaggagtacacagtgttcctttcctctgacatgaattttccgtaataggg 454
Query: 261 atggagggaaaatatcattagcatagcctcctgtttttctctgacactgctactatgaac 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atggagggaaaatatcattagcatagcctcctgtttttctctgacactgctactatgaac 514
Query: 321 aaaataatttgaaactcttcagaaaacagctcttgggactcctcaacttgtgagtagcta 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 515 aaaataatttgaaactcttcagaaaacagctcttgggactcctcaacttgtgagtag-ta 573
Query: 381 -tggataatgaaaatggat 398
||||||| ||||||||||
Sbjct: 574 atggataaggaaaatggat 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 798
Length adjustment: 9
Effective length of query: 389
Effective length of database: 789
Effective search space: 306921
Effective search space used: 306921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_e15.g1 MSMg01no370_e15.g1 CHROMAT_FILE:
MSMg01no370_e15.g1 PHD_FILE: MSMg01no370_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:18 2005
(319 letters)
>mm_chr1_154483684_154484402
Length = 719
Score = 617 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Minus
Query: 1 tctttaaatgctgtgtgttgggcctgcgcctggcacctgtaagtcttctctcagcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tctttaaatgctgtgtgttgggcctgcgcctggcacctgtaagtcttctctcagcttctg 460
Query: 61 tcatgcagtaagagactgctctgcttgactgtcccctcctccattagtactgtgagtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcatgcagtaagagactgctctgcttgactgtcccctcctccattagtactgtgagtgag 400
Query: 121 gcatcacagccgtgaggctcagctcagtctgagatatctagcaaagggttcagcaaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcatcacagccgtgaggctcagctcagtctgagatatctagcaaagggttcagcaaggct 340
Query: 181 ttatttcaagtaataattaggcaaagccctttaaaatccaactcaagacctaatccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttatttcaagtaataattaggcaaagccctttaaaatccaactcaagacctaatccaaga 280
Query: 241 ccctaatatccctctcttggagatgtggtgatctactcttgtcaagtggctcctaatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ccctaatatccctctcttggagatgtggtgatctactcttgtcaagtggctcctaatctc 220
Query: 301 tatcgatttttgttctgtg 319
|||||||||||||||||||
Sbjct: 219 tatcgatttttgttctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
