CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGATCTCTTCGAAGTTGTTGTAAGGAG
TAAACACCTGTAAAGTTTAGCACAGCTGGGCTCAGGAGTGCCCAGTCAAA
GCTAGAAGCACTTAAAGAAATAAAAACAAAACAAAACAAAACAAAACAAA
ACAAAAAGTCAGTAAATCGTCGGGGGTGATCATGGGGTAGACCCCTGAGC
ACCAGGTAACTTCGCCAGTTCCTGGTGACCAGTTAGCTTGAGCTGCTTTC
TTTCTGCTCCCTCGTCTTCCTGTGGCTGCCCAGCACCCCAGATCAGACCA
AAGTCATAGCCACACTGTCCTAAGGACGGTGATGTGCTCTGGCAGAACCA
GGCAAAAGACCTTCCTGTCTCCTTCATCTCTAGGTAAGCAGGTGCCCGAG
GCGCCCTTACTCACAACTCTCAGGCATCTGCCTTTGACCTTGGCACCTTC
CCCAGGCATTCTGCTGGGTACCTGGGATGCTGCCAAGTCACCCAGCCTGC
CAAGTACACTCTTCCTTCACTCCTGTGACATANAANACCCACGTCCCTTC
CAGCAGGGATGCTGCCTGGAGGCCTGTNAGGAGGTGACTGTTCTGACGCA
CTCCCTTCTTTGCTGGACAGGGTCCATCTTTCTGAAAAGGTTTTCTGGTT
TCAAAACCTGGTTCTAAATTCCAGGATCCATTCTCCGGTAGCGGTTTTAA
AAAACATAAAG

TTTAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCACCTGTACCATACTGAATGGCTGAGAAGCACCTGAAAA
AATGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAATAACACTG
AGATTCCATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGATGA
CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTT
GGTGGGATTGCAACCTTGTACAACCACTCTGGAAATCAGTCTGGCCGTTC
CTCAGAAAATTGGACATAGTACTACGGTAGTATCCCCCAATACCTCTCCT
GGGCATATATCCAGAAGATGTTCCAATTGGTAAGAAAGACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTGTAATAGCCAGAAGCTGGAAAGAATCC
AGATGCCCCTCTACAGAGGAATGGATACAAAAATGTGGTACATTTACACA
ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTTGT
CAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAGCCCAATCAC
AAAAGAACTCAAATGATATGTACTCACTGGATAAGTGGATATTAACCTCA
GAAACTTATAATACCCCCGATATAAGATACATTTTTTGAAACCCTTGAAA
TTCCAAAAGATTGAAAACCATGGGTGGGAACCTTTGGCCTTGTCT

Query= MSMg01no371_p14.b1 MSMg01no371_p14.b1 CHROMAT_FILE:
MSMg01no371_p14.b1 PHD_FILE: MSMg01no371_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:37 2005
         (548 letters)



>mm_chr1_72785064_72786011
          Length = 948

 Score =  967 bits (500), Expect = 0.0
 Identities = 531/548 (96%), Gaps = 10/548 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgatctcttcgaagttgttgtaaggagtaaacacctgtaaagtttagcacagctgggctc 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgatctcttcgaggttgttgtaaggagtaaacacctgtaaagtttagcacagctgggctc 270

                                                                       
Query: 61  aggagtgcccagtcaaagctagaagcacttaaagaaataaaaacaaaacaaaacaaaaca 120
           ||||||||||||||||||||||||||| |||||||||||          |||||||||||
Sbjct: 271 aggagtgcccagtcaaagctagaagcatttaaagaaata----------aaaacaaaaca 320

                                                                       
Query: 121 aaacaaaacaaaaagtcagtaaatcgtcgggggtgatcatggggtagacccctgagcacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 aaacaaaacaaaaagtcagtaaatcgtcgggggtgatcatggggtaggcccctgagcacc 380

                                                                       
Query: 181 aggtaacttcgccagttcctggtgaccagttagcttgagctgctttctttctgctccctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtaacttcgccagttcctggtgaccagttagcttgagctgctttctttctgctccctc 440

                                                                       
Query: 241 gtcttcctgtggctgcccagcaccccagatcagaccaaagtcatagccacactgtcctaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcttcctgtggctgcccagcaccccagatcagaccaaagtcatagccacactgtcctaa 500

                                                                       
Query: 301 ggacggtgatgtgctctggcagaaccaggcaaaagaccttcctgtctccttcatctctag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggacggtgatgtgctctggcagaaccaggcaaaagaccttcctgtctccttcatctctag 560

                                                                       
Query: 361 gtaagcaggtgcccgaggcgcccttactcacaactctcaggcatctgcctttgaccttgg 420
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaagcaggtgcccgaggctcccttactcacaactctcaggcatctgcctttgaccttgg 620

                                                                       
Query: 421 caccttccccaggcattctgctgggtacctgggatgctgccaagtcacccagcctgccaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 caccttccccaggcattctgctgggtacctgggatgctgccaagtcagccagcctgccaa 680

                                                                       
Query: 481 gtacactcttccttcactcctgtgacatanaanacccacgtcccttccagcagggatgct 540
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 681 gtacactcttccttcactcctgtgacatagaaaacccacgtcccttccagcagggatgct 740

                   
Query: 541 gcctggag 548
           ||||||||
Sbjct: 741 gcctggag 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)