Query= MSMg01no371_p24.b1 MSMg01no371_p24.b1 CHROMAT_FILE:
MSMg01no371_p24.b1 PHD_FILE: MSMg01no371_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:39 2005
(403 letters)
>mm_chr1_21812944_21813746
Length = 803
Score = 627 bits (324), Expect = 0.0
Identities = 336/340 (98%)
Strand = Plus / Minus
Query: 1 ttactttcaaacaatgaaggggaaaaaataagagtgtaaagagtgaggaaatggatttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttactttcaaacaatgaaggggaaaaaataagagtgtaaagagtgaggaaatggatttag 281
Query: 61 aactttatccaaaagagatatagtgtttgtcttaaattattaatggtattaaatatcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aactttatccaaaagagatatagtgtttgtcttaaattattaatggtattaaatatcttt 221
Query: 121 ccttttatgtgtttccatgaacccatttttatataggtagcactaattgaacttgtttaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 220 ccttttatgtgtttccatgaacccatttttatataggtagcacgaattgaacttgtttaa 161
Query: 181 ataaagaaatgaataaggagtggatgaggttgagagggagatgtgatcaagcatgctggg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 160 ataaagaaatgaataaggagtggatgaggttgagagggagatgtgatcaagcatcctggg 101
Query: 241 gggaactggaaggagtgaataagggatgaatatgaccaaggtacatcacaggcatgtttg 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gggaactggaaggagtgagtaagggatgaatatgaccaaggtacatcacaggcatgtttg 41
Query: 301 aaatttttaaatgattaaatagatagatagatagatagat 340
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 40 aaatttttaaatgattagatagatagatagatagatagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_p24.g1 MSMg01no371_p24.g1 CHROMAT_FILE:
MSMg01no371_p24.g1 PHD_FILE: MSMg01no371_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:39 2005
(436 letters)
>mm_chr1_21636498_21637334
Length = 837
Score = 799 bits (413), Expect = 0.0
Identities = 428/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 5 gaattcaacactctcttgttatgaaagacaatattagagacctggaaggcagtttaaaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacactctcatgttatgaaagacaatattagagacctggaaggcagtttaaaaa 264
Query: 65 aatgaatatttccatctaaccttaaaatgactcagaatgataggcctggaggataacaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgaatatttccatctaaccttaaaatgactcagaatgataggcctggaggataacaat 324
Query: 125 tcttcacgtcccattttcctatttggtcacacacttgagagaaccaataaatgaccgttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttcacgtcccattttcctatttggtcacacacttgagagaaccaataaatgaccgttc 384
Query: 185 ctgtttatctccctgctcatcctctatgggaataaatataaaaaaaaa-tggcagctcct 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 ctgtttatctccctgctcatcctctatgggaataaatataaaaaaaaaatggcagctcct 444
Query: 244 ctcctggagtgacctcttggatgcagcagatactggtagacttagcagaagaggcacgca 303
||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||
Sbjct: 445 ctcctggagtgacctcttggatgcagcagatactggtaggcttagcagaagagacatgca 504
Query: 304 tgcaatacatgcagttttagatctgattgtataggtgtagataagcttcaaacaaacagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcaatacatgcagttttagatctgattgtataggtgtagataagcttcaaacaaacagg 564
Query: 364 ggccgatgagtatttgttgagtgagtgagaggatgtataaagaattcactgtggaggatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggccgatgagtatttgttgagtgagtgagaggatgtataaagaattcactgtggaggatg 624
Query: 424 cattgatctcctc 436
|||||||||||||
Sbjct: 625 cattgatctcctc 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 837
Length adjustment: 9
Effective length of query: 427
Effective length of database: 828
Effective search space: 353556
Effective search space used: 353556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
