Query= MSMg01no372_p03.b1 MSMg01no372_p03.b1 CHROMAT_FILE:
MSMg01no372_p03.b1 PHD_FILE: MSMg01no372_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:48 2005
(604 letters)
>mm_chr1_71391342_71392345
Length = 1004
Score = 1069 bits (553), Expect = 0.0
Identities = 589/601 (98%), Gaps = 1/601 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatgttttctcattaaagactgatcagctttaagatgttatgcactggccacat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaatgttttctaattaaagactgatcagctttaagatgttatgcactggccacat 263
Query: 65 aaagctgttgaaacctaacacattggcattcccctttggagatttatttttaattatttg 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaagctgttgaaacctaacacagtggcattcccctttggagatttatttttaattatttg 323
Query: 125 tgacagagagtattatgtgcacattagtgaaggtgtccctggagac-agaggaaggtgtt 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 tgacagagagtattatgtgcacattagtgaaggtgtccctggagaccagaggaaggtgtt 383
Query: 184 ggatcctctggaattggagtcgtgggcgttgtgagctgcctgatggggaactgggacttg 243
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 384 ggatcctctggaattggagtcgtaggcgttgtgaactgcctgatggggaactgggacttg 443
Query: 244 aactcaggccttctgcaagagaattatgtactcttaacctctgagccacctctccagctc 303
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 444 aactcaggccttctgcaagagaattatgtactcttaacctctgagccatctccccagctc 503
Query: 304 cggactatcaccactctcaattgagatgctttgccctgtatttaaattccattaagctta 363
| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 504 cagactacccccactctcaattgagatgctttgccctgtgtttaaattccattaaactta 563
Query: 364 gagaattttgaagaagtaaagccacacattcaagatgctccaaactcatttaaaagtttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagaattttgaagaagtaaagccacacattcaagatgctccaaactcatttaaaagtttt 623
Query: 424 ctagtaactaaattaagcacaagttttaaatttttaaattaaggctgttgtcagttcctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctagtaactaaattaagcacaagttttaaatttttaaattaaggctgttgtcagttcctc 683
Query: 484 tgtcaccctggcacatgccaagtattcagaaccctcactgatcatgataccataataaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtcaccctggcacatgccaagtattcagaaccctcactgatcatgataccataataaaa 743
Query: 544 ataacaaatatatcaatcaacagaaatttaccagatcattaaggaaacaatgttgcttaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ataacaaatatatcaatcaacagaaatttaccagatcattaaggaaacaatgttgcttaa 803
Query: 604 t 604
|
Sbjct: 804 t 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_p03.g1 MSMg01no372_p03.g1 CHROMAT_FILE:
MSMg01no372_p03.g1 PHD_FILE: MSMg01no372_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:48 2005
(512 letters)
>mm_chr1_71567924_71568835
Length = 912
Score = 723 bits (374), Expect = 0.0
Identities = 380/382 (99%)
Strand = Plus / Minus
Query: 131 aatttggtaagataatggtagtgaatttcaagttaaattgtggacaccagaaacatgtac 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 aatttggtaagataatggtagtgaatttcaagttaaattgtggacaccagaaacatgtac 853
Query: 191 cagaatcctaatccccagtatgatggaggtgactttataaggacatacagcgtaaatgta 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 cagaatcctaatccccagtatgatggaggtgactttataaggacatacagcgtaaatgta 793
Query: 251 attaagttacagtgaagtgctaccgaatttgggcggacctgtttcaacgtgattggtgtc 310
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 792 attaagttacagtgaagtgctaccgaattaggggggacctgtttcaacgtgattggtgtc 733
Query: 311 cttatataggaagagaggaagaaacacaagcttacccataactgcaaggatgcatatgca 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cttatataggaagagaggaagaaacacaagcttacccataactgcaaggatgcatatgca 673
Query: 371 tgcatgggtacaaggaagtgtgtgacatgttcacacaggtggccgggtgaacatggaggc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgcatgggtacaaggaagtgtgtgacatgttcacacaggtggccgggtgaacatggaggc 613
Query: 431 agagaatggaattaagccaccaccaagccaaaatacctgggagtacaagatagaagggac 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agagaatggaattaagccaccaccaagccaaaatacctgggagtacaagatagaagggac 553
Query: 491 agggaggactgctcctccctcg 512
||||||||||||||||||||||
Sbjct: 552 agggaggactgctcctccctcg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
