Query= MSMg01no373_b20.b1 MSMg01no373_b20.b1 CHROMAT_FILE:
MSMg01no373_b20.b1 PHD_FILE: MSMg01no373_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:00 2005
(575 letters)
>mm_chr1_190732030_190733004
Length = 975
Score = 625 bits (323), Expect = 0.0
Identities = 346/355 (97%), Gaps = 5/355 (1%)
Strand = Plus / Minus
Query: 6 gaattctctgacatgctctaaactc-tctgagactctcacgggtcacaagtgtgcagtcg 64
||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 354 gaattctctgacaggctctaaactcttct-agactctcacgggtcacaagtgtgcagtcg 296
Query: 65 aggtgagacatgtgatcatggtatttctttgcttcaaggctctggtaatatttcactgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggtgagacatgtgatcatggtatttctttgcttcaaggctctggtaatatttcactgga 236
Query: 125 ctctcagcaatctccctgctcctgtcacagcctacaaggttgggcctgccctgcctctag 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 235 ctctcagcaatctccctgctcctgtcacagcctacaaggttgggcctgccttgcctctag 176
Query: 185 tctctcctagtgccatctttacctccttcccaacgctctagccacacaagctttcttcta 244
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 175 tctctcctagtgccatctttacctccttcccaacgctccagccacacaagctttctccta 116
Query: 245 ttttcttgagcacaccaaggtcactcctgcctctgggccttgcatttgctgttcattttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ttttcttgagcacaccaaggtcactcctgcctctgggccttgcatttgctgttcattttg 56
Query: 305 tctggaacttttttttt---cctcctatatcttcacatgactgcctctgtcttgt 356
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 55 tctggaacttttttttttttcctcctatatcttcacatgactgcctctgtcttgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_b20.g1 MSMg01no373_b20.g1 CHROMAT_FILE:
MSMg01no373_b20.g1 PHD_FILE: MSMg01no373_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:01 2005
(329 letters)
>mm_chr1_190559992_190560720
Length = 729
Score = 636 bits (329), Expect = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus
Query: 1 ccacctctctgatctcattcctcaccaggtcccttcccatcatcagaacgaaccacactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacctctctgatctcattcctcaccaggtcccttcccatcatcagaacgaaccacactc 260
Query: 61 tggcttagctaggaagttcttcaggaagctgcctgtctactctcttgctggcctgaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcttagctaggaagttcttcaggaagctgcctgtctactctcttgctggcctgaatct 320
Query: 121 gagttgaaataagcatactcgtggcagctacttctaggtctgtgcagataaaaaaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagttgaaataagcatactcgtggcagctacttctaggtctgtgcagataaaaaaacttg 380
Query: 181 agttggggcaatctgagtagaattctgagactaaacgtcaaggacaccttttttctacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttggggcaatctgagtagaattctgagactaaacgtcaaggacaccttttttctacac 440
Query: 241 tggaacttgaaacagtggccactaattttattcaagtaatggagggactggagaggaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaacttgaaacagtggccactaattttattcaagtaatggagggactggagaggaagt 500
Query: 301 tcagttgatagtgcttgcctgacatgcag 329
|||||||||||||||||||||||||||||
Sbjct: 501 tcagttgatagtgcttgcctgacatgcag 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
