Query= MSMg01no373_c22.b1 MSMg01no373_c22.b1 CHROMAT_FILE:
MSMg01no373_c22.b1 PHD_FILE: MSMg01no373_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:05 2005
(490 letters)
>mm_chr1_130932611_130933500
Length = 890
Score = 625 bits (323), Expect = 0.0
Identities = 344/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 9 gaattccagagcatatgaaatttgccagttgttgtactatacatatgttgaaatatatag 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gaattccagagcatatgaaatttgccagttgttgtactatacatatgttgaaatatatag 292
Query: 69 ctaaataacctactagcttatgaaacatgggtggaaaaagaaaagtaaaaaattaaaaaa 128
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 291 ctaaataacctactagcttatgaaacatgggtggaaaaacaaaagtaaaaaattaaaaaa 232
Query: 129 ataaagatagattgaaaatgttggagagacagcttgactcccaggatgtctgtcataacc 188
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 231 ataaagatagattgaaaatgttggagagacagcttgactcccaggatgtctgccataaca 172
Query: 189 aggcccccatgtgagacagcccccacccc-ttacctagcctaactaggacccccattgtg 247
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 171 aggcccccatgtgagacagcccccaccccaatacctagcctaactaggacccccatggtg 112
Query: 248 accagcagaggcaggacctagaccccctgctggggacacatcatcctttggcttgcaact 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 accagcagaggcaggacctagaccccctgctggggacacatcatcctttggcttgcaact 52
Query: 308 ctgcccagggcagagctgatgctccaggccacaatccccacccagagacag 358
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 51 ctgcccagggcagagctgatgctccaggccactatccccacccagagacag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_c22.g1 MSMg01no373_c22.g1 CHROMAT_FILE:
MSMg01no373_c22.g1 PHD_FILE: MSMg01no373_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:05 2005
(249 letters)
>mm_chr1_130797245_130797893
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 cctttgcaaagttcatgatcttaagtggctttattccattatttaatccttttaatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctttgcaaagttcatgatcttaagtggctttattccattatttaatccttttaatattt 260
Query: 61 tccctacccatcacctgccttagccttccaggctgtagcttttattgtgttatccgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccctacccatcacctgccttagccttccaggctgtagcttttattgtgttatccgtgct 320
Query: 121 ttatgttgtgatcttactgtttgtttctcttggcaatcttttcgagagctaacattttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatgttgtgatcttactgtttgtttctcttggcaatcttttcgagagctaacattttaa 380
Query: 181 gggcaatgtctactcctcgcatttatttcccggtattttcccatttttactggtttttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcaatgtctactcctcgcatttatttcccggtattttcccatttttactggtttttat 440
Query: 241 tttagcatg 249
|||||||||
Sbjct: 441 tttagcatg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
