NCTCCTATTTCGAGAGGATCCGCGGAATTCATTGCTTAGCAGCTTAGGCT
CCGCACTGTGAGAGGCCATGGAAGGCCATTGGTGAAGGTGAAGCCTCAGT
TGCAATTGATGGCCCAGGACTGAAGGGGTCATGCAAAGGAGTTGAGGCTT
GGCACCATGAAAAGGGCCTATGAGAGGCTATTGGTGAAGCCTAGTTACAG
TGGAAGTCAGCAGCATTTTGGAGATGCCAGTACCATGAGACGGCCACTAA
GAACAGCAGCAGCAGTGGACTACAGGCAGATGGAGCATAGAAGACAATGT
GTGTGCTACAAAGGGCATGGCTGGAGAAGTGACCCAAGCCCTTGGAGGAG
CCCAGAAGTTCATGAGCTGGATCCCAGACATTGGATGGTTAGAGATTGAT
TTTTGCTTTTGATTGTGACTGTGCCCTGATATTTTTCCCTCTTGAAGGAA
GAAACTATTTTAGTGTAACCCACAGTTAAGAGACTTTTAATTGTAAAAAG
GCTTTGGGTTTTAAAAGAGATGGATATTCCAAAGAGATTGAAATTTTAAG
AATACGTAAAGACTGTGGGACTTTTAAAGTTATTTAGATCTCTGGGATGA
GTAAGAATGTATGAGCTGAAGCCTTATTACTGTTGTGTTTGTTTGCCACT
GTTCCTAGCTGCTTTCTTTTCTGGCTTAATTTTTTGCCAACTGTACCCGC
TTTTAGTTTTCTCCAAGGTATGGATTTTTCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXACTAGCAGAAGTGAATCCATCTGGAGCAACGTAATATTTAGTAC
TAAATGAAGAATAAACCACTTAACAGAAGATTGCTTATGAAAACCAAAAA
AGTGTATGACCCAATAAAATAGATAGTTTACAAGAACACCTACAAAAAAA
AGGGTATTGTCTAAAGAAATTAAAAGTATGATCTGAGACTGGGGTGAAAG
AGAGTGAATTAGCTTAACATGCTGAGTAAAGAGAAGAAGGACCTGTGTAG
TCACAGGACGCTGGCTCCCAAGGGCAGGGGCTGATGCTTTGAGCTTTTCT
ACTCAGGATTATAAAGAAAGACAGTCAGAGTTTTAGAAAGTACAGAATGC
AGTAAGTGACCCTACTGTGTTCTAAAGTCTTTTAAGAAACTTCATTAATT
GCAGGGTTCCTTGACTGCTTTATAATCAAAATGGCACAAATTGAAAATAA
ACTACATGTACTTGAAGTTACATCCTAGAATGTGATTTCATCCAGTAACT
CCACCCAGTACAGAGTTGAATAGAGTATGGAGAGAGGCCAGCTTGGATGT
ACCTCAGTACTGGGTGGACTTTTATTATTGAGATTACCAATAAGTGTTTT
CCCAGGACCTAATTATTATTATGGTATGATGGAGAGTTGTCTACAATGAA
CTGAATCGGCCCTCCTTGTTTTA

Query= MSMg01no373_h11.g1 MSMg01no373_h11.g1 CHROMAT_FILE:
MSMg01no373_h11.g1 PHD_FILE: MSMg01no373_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:26 2005
         (572 letters)



>mm_chr1_109260978_109261949
          Length = 972

 Score = 1067 bits (552), Expect = 0.0
 Identities = 567/572 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actagcagaagtgaatccatctggagcaacgtaatatttagtactaaatgaagaataaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagcagaagtgaatccatctggagcaacgtaatatttagtactaaatgaagaataaac 260

                                                                       
Query: 61  cacttaacagaagattgcttatgaaaaccaaaaaagtgtatgacccaataaaatagatag 120
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttaacagaaaattgcttatgaaaaccaaaaaagtgtatgacccaataaaatagatag 320

                                                                       
Query: 121 tttacaagaacacctacaaaaaaaagggtattgtctaaagaaattaaaagtatgatctga 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tttacaagaacacctacaaaaaaaagggttttgtctaaagaaattaaaagtatgatctga 380

                                                                       
Query: 181 gactggggtgaaagagagtgaattagcttaacatgctgagtaaagagaagaaggacctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gactggggtgaaagagagtgaattagcttaacatgctgagtaaagagaagaaggacctgt 440

                                                                       
Query: 241 gtagtcacaggacgctggctcccaagggcaggggctgatgctttgagcttttctactcag 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtagtcacaggactctggctcccaagggcaggggctgatgctttgagcttttctactcag 500

                                                                       
Query: 301 gattataaagaaagacagtcagagttttagaaagtacagaatgcagtaagtgaccctact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattataaagaaagacagtcagagttttagaaagtacagaatgcagtaagtgaccctact 560

                                                                       
Query: 361 gtgttctaaagtcttttaagaaacttcattaattgcagggttccttgactgctttataat 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgttctaaagtcttttaagaagcttcattaattgcagggttccttgactgctttataat 620

                                                                       
Query: 421 caaaatggcacaaattgaaaataaactacatgtacttgaagttacatcctagaatgtgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaatggcacaaattgaaaataaactacatgtacttgaagttacatcctagaatgtgat 680

                                                                       
Query: 481 ttcatccagtaactccacccagtacagagttgaatagagtatggagagaggccagcttgg 540
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 ttcatccagtaactccacccagtacagagttgaatagagtatggagagcggccagcttgg 740

                                           
Query: 541 atgtacctcagtactgggtggacttttattat 572
           ||||||||||||||||||||||||||||||||
Sbjct: 741 atgtacctcagtactgggtggacttttattat 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)