Query= MSMg01no375_e15.b1 MSMg01no375_e15.b1 CHROMAT_FILE:
MSMg01no375_e15.b1 PHD_FILE: MSMg01no375_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:50 2005
(426 letters)
>mm_chr1_134851177_134851999
Length = 823
Score = 702 bits (363), Expect = 0.0
Identities = 406/427 (95%), Gaps = 15/427 (3%)
Strand = Plus / Plus
Query: 1 tccttaaagctccttttcaccactggtccacatgtgtgacaggtctgagctcacctgagg 60
|||||||||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 211 tccttaaagctcctcttcaccactggtccacatgtgtgacag-------ctc---tgagg 260
Query: 61 tttgtgcacagaaagcaagatgccttgacaactctcagctatggtggcttctagctgggg 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tttgtgcacagaaagcaagatgccttgacagctctcagctatggtggcttctagctggga 320
Query: 121 aatgctatcaatgagagcccaccctggctagggccaggctagacaatctcggaagtcctt 180
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgctagcaaagagagcccaccctggctagggccaggctagacaatctcggaagtcctt 380
Query: 181 tccaggacaaaggacatccagactgagtccttcctttccttttcccactcaatgtatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaggacaaaggacatccagactgagtccttcctttccttttcccactcaatgtatgaa 440
Query: 241 ccactgtggtggaaaacatacaagatcccgactcgatgagaaacatccctgtcct-ctac 299
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 441 ccactgtggtggagaacatacaagatcccgactcgatgagaaacatccctg-ccttctac 499
Query: 300 tctcctcctccccagcatggtttacacactgtccccaatacacctcgtcacactgcaaca 359
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctcctcc---ccagcatggtttacacactgtccccaatacacctcgtcacactgcaaca 556
Query: 360 cttgagccctgtgccaagcaggaatgcagtgaatggttctccatgcactctggccactgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttgagccctgtgccaagcaggaatgcagtgaatggttctccatgcactctggccactgc 616
Query: 420 tcctgat 426
|||||||
Sbjct: 617 tcctgat 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 823
Length adjustment: 9
Effective length of query: 417
Effective length of database: 814
Effective search space: 339438
Effective search space used: 339438
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_e15.g1 MSMg01no375_e15.g1 CHROMAT_FILE:
MSMg01no375_e15.g1 PHD_FILE: MSMg01no375_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:50 2005
(244 letters)
>mm_chr1_135011116_135011760
Length = 645
Score = 435 bits (225), Expect = e-126
Identities = 240/245 (97%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 1 tatttttataacctctgttgtcttccaatttatttcag-ttttttgtgttttcttagaat 59
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 306 tatttttataacctctgttgtcttccaatttatttcagtttttttgtgttttcttagaat 247
Query: 60 ttgttgaggaatttattcctgtcatgtttaaatacatttaggcggggccgggcgtggtgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgttgaggaatttattcctgtcatgtttaaatacatttaggcggggccgggcgtggtgg 187
Query: 120 cgcatgcctttaatcccagcactctggaggcagaggcaggcggatttctgagttcgaggc 179
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 186 cgcacgcctttaatcccagcactggggaggcagaggcaggcggatttctgagttcgaggc 127
Query: 180 cagcctggtctacaaagtgaggtccaggcagccagggctacacagagaaaccctgtctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 126 cagcctggtctacaaagtgaggtccaggcagccagggctacacagagaaaccccgtctcc 67
Query: 240 aaaaa 244
|||||
Sbjct: 66 aaaaa 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
