TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTGAAACCAAGGCCAACATCAACTCTCTGTAATGTGCATATTGAA
TGAAAGGATGGACCATCTAGAGACTACCATACCCGGGGATCCATCCCATA
ATCAGCCTCCAAATGCTGACACCATTGCATACACTAGCAAGATTTTTCTA
AAAGGACCCTGATATAGCTGTCTCTTGTGAGGCTATGCTAGGGCCTAGCA
AACACAGAAGTGGATGCTCACAGTTAGCTATTGGATGGATCACAGGGCCC
CAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACC
CTATAGATGGAATAACAGTATGAACTAACCAGTACCCCCTGGAGCTTATG
TCTCTAGCTGTATATGTATCAGAAGATGGCCTAGTTGGCCATCACTGGGG
AAGAGAGGCCCATTGGTCTTGCAAACTTTATATACCTCAGTACAGGGGAA
CACCACAGCCAAAAAGTGGGAGTGGGTGGGTAGGGGGAGTGGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNN

AATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTTTTTTTTTTCCTCTGTGATCACA
GAAGTAGACCCAGCTTAGTATTTCATCTATTGGGAACAGAAATGTGGGTG
GCGCACAGGAAATGAATCCAGGCTAGGATGGAGAGGATGTGGTGGGAATG
AGATATTCAGATGAAAGGCAGAAACTCCAGAAATAAGAAAATAGGCATCA
AGAATTGGGAAGGGTGAGGGGACATCTCTTGGACTGCCAGAGATCTGGGA
TGAATGGAGGCCCCAGGGTGTCTATGGGAACAGCTCTAACTGAAACTCTT
AGAAATAGAATATATGGATCCTGAAATATTCAAACCTCTGTAGCCAGATA
GGACTCACAATGAAGGGATAAGGACAGCAATACACTCACAAATCCTTCAA
TCCAGTGTGCTGCCTACAAGATGTGCAGGGACCAAGATAGAGCAGAGACA
GATGGAATGCCCAATCAATGACTGCCTCAAATTGAGGCCCATACCAGGGA
CAAGAACCAATCACTGACATTATTAATGATACTTAGTTATTTGTTAACTT
TACCTCCCAATATCAGTCACCATTTTCTCCCCTAAACCTCTGACCCAAAT
TCTTCTCCCCCAATTCCTGTTCCCACTTCCTTCTCCCTTTCCCCCAAAAA
AAAGGGGGTTTTGCTTAATATCCCCCCCTGGTGGCAAAATTNAGTCATTG

Query= MSMg01no376_d23.g1 MSMg01no376_d23.g1 CHROMAT_FILE:
MSMg01no376_d23.g1 PHD_FILE: MSMg01no376_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:06 2005
         (481 letters)



>mm_chr1_126497984_126498864
          Length = 881

 Score =  922 bits (477), Expect = 0.0
 Identities = 480/481 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttttttttttcctctgtgatcacagaagtagacccagcttagtatttcatctattggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttttttttttcctctgtgatcacagaagtagacccagcttagtatttcatctattggg 260

                                                                       
Query: 61  aacagaaatgtgggtggcgcacaggaaatgaatccaggctaggatggagaggatgtggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagaaatgtgggtggcgcacaggaaatgaatccaggctaggatggagaggatgtggtg 320

                                                                       
Query: 121 ggaatgagatattcagatgaaaggcagaaactccagaaataagaaaataggcatcaagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaatgagatattcagatgaaaggcagaaactccagaaataagaaaataggcatcaagaa 380

                                                                       
Query: 181 ttgggaagggtgaggggacatctcttggactgccagagatctgggatgaatggaggcccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgggaagggtgaggggacatctcttggactgccagagatctgggatgaatggaggcccc 440

                                                                       
Query: 241 agggtgtctatgggaacagctctaactgaaactcttagaaatagaatatatggatcctga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggtgtctatgggaacagctctaactgaaactcttagaaatagaatatatggatcctga 500

                                                                       
Query: 301 aatattcaaacctctgtagccagataggactcacaatgaagggataaggacagcaataca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatattcaaacctctgtagccagataggactcacaatgaagggataaggacagcaataca 560

                                                                       
Query: 361 ctcacaaatccttcaatccagtgtgctgcctacaagatgtgcagggaccaagatagagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcacaaatccttcaatccagtgtgctgcctacaagatgtgcagggaccaagatagagca 620

                                                                       
Query: 421 gagacagatggaatgcccaatcaatgactgcctcaaattgaggcccataccagggacaag 480
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagatagatggaatgcccaatcaatgactgcctcaaattgaggcccataccagggacaag 680

            
Query: 481 a 481
           |
Sbjct: 681 a 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)