Query= MSMg01no376_e23.b1 MSMg01no376_e23.b1 CHROMAT_FILE:
MSMg01no376_e23.b1 PHD_FILE: MSMg01no376_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:11 2005
(446 letters)
>mm_chr1_57651277_57652122
Length = 846
Score = 816 bits (422), Expect = 0.0
Identities = 437/442 (98%)
Strand = Plus / Plus
Query: 5 gaattccttttcccttttaccctgtggtgctgaaaattcatagatgtgcaggctatttgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttttcccttttaccctgtggtgctgaaaattcatagatgtgcaggctatttgg 264
Query: 65 ttagaggagttctcaacaggctcttactgaagcatcaaagctttccatttcttgttgcag 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagaggagttctcaacaggcgcttactgaagcatcaaagctttccatttcttgttgcag 324
Query: 125 gctgggactctggacatctggctggaaattatgagagaaacaaataaacaatatacatca 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 gctgggactctggacatctggctggaaatcatgagagaaacaaataaacaatatacatca 384
Query: 185 cgcaggagctactgctgatgcgacatttgccgttgctttacagtttgagattgcaatggt 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgcaggagctactgctgatgtgacatttgccgttgctttacagtttgagattgcaatggt 444
Query: 245 agcctcatgttgtctagctaatacccgtggggttacctataattaggtaagagggtagtg 304
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 agcctcatgttgtctagctaatacccttggggttacctataattaggtaagagggtagtg 504
Query: 305 gaatagaggaggcagtaaattaaatattttgacccgtaaaaggaaggagtggttacagct 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatagaggaagcagtaaattaaatattttgacccgtaaaaggaaggagtggttacagct 564
Query: 365 gaatgcccaggcatgctgagctgcctctattacttcctgaagccccatcctgtgtgcaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaatgcccaggcatgctgagctgcctctattacttcctgaagccccatcctgtgtgcaga 624
Query: 425 gcctgaacagctctgtccttga 446
||||||||||||||||||||||
Sbjct: 625 gcctgaacagctctgtccttga 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_e23.g1 MSMg01no376_e23.g1 CHROMAT_FILE:
MSMg01no376_e23.g1 PHD_FILE: MSMg01no376_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:11 2005
(434 letters)
>mm_chr1_57838380_57839213
Length = 834
Score = 812 bits (420), Expect = 0.0
Identities = 432/438 (98%), Gaps = 4/438 (0%)
Strand = Plus / Minus
Query: 1 actagtgtgttgttgctgctgttgctgttgttgtttctggaacagtgaggctgtgggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 actagtgtgttgttgctgctgttgctgttgttgtttctggaacagtgaggctgtgggtct 388
Query: 61 ttcacacacctgtggcattcacctgaccatcgaggacctgttgctcctctgcagaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttcacacacctgtggcattcacctgaccatcgaggacctgttgctcctctgcagaatcat 328
Query: 121 tgtcacagggagttcgctagctagcagtgtttccgtggtcagtgtctatacaactgatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgtcacagggagttcgctagctagcagtgtttccgtggtcagtgtctatacaactgatag 268
Query: 181 atgttttcagagacaccgtgcaccactcctagggtgctgtgcagaaaagcaggagccctg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgttttcagagacactgtgcaccactcctagggtgctgtgcagaaaagcaggagccctg 208
Query: 241 gggtcagacagcaagcagagcatcccacacttagcaacttttcagtcagtcaagttctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gggtcagacagcaagcagagcatcccacacttagcaacttttcagtcagtcaagttctct 148
Query: 301 gacttccttgagctctagtgttcatttctcaaaagggggtataaactccagcttgcaagc 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 147 gacttccttgagctctagtgttcctttctcaaaagggggtataaactccagcttgcaagc 88
Query: 361 tcattgtcaagttgaagcgagtggatttgtaagtgataa----agctatattcagttggt 416
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 87 tcattgtcaagttgaagcgagtggatttgtaagtgataaagctagctatattcagttggt 28
Query: 417 tctggatccgaaccaggt 434
||||||||||||||||||
Sbjct: 27 tctggatccgaaccaggt 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
