Query= MSMg01no377_l02.b1 MSMg01no377_l02.b1 CHROMAT_FILE:
MSMg01no377_l02.b1 PHD_FILE: MSMg01no377_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:58 2005
(455 letters)
>mm_chr1_129827207_129828065
Length = 859
Score = 853 bits (441), Expect = 0.0
Identities = 450/455 (98%), Gaps = 4/455 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaaagaattaatcaccttatataaggtcaataccatctactaaggcttcaaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaattctcaaagaattaatcaccttatataaggtcaataccatctactaaggcttcaaac 600
Query: 65 gattatgcaatttcagactggcagaactgaaagttccaaacctaatcaaagactt----t 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 599 gattatgcaatttcagactggcagaactgaaagttccaaacctaatcaaagactttaaat 540
Query: 121 aatctctcctaccaaaagcaatcatctcctctaggaaggacctactcaacaacaaaaggc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 539 aatctctcctaccaaaagcaatcatctcctctaggaaggacctaatcaacaacaaaaggc 480
Query: 181 agctgagtttgcaagccttggtgcacctacctgggtcactggaatgtagagaggctctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agctgagtttgcaagccttggtgcacctacctgggtcactggaatgtagagaggctctcc 420
Query: 241 attatgcagcagggtaagtttcccgtgctggtgcaggcggccttctggctttaagtttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 attatgcagcagggtaagtttcccgtgctggtgcaggcggccttctggctttaagtttgc 360
Query: 301 catctccttgggaccgcctttcttaccactctcctgtccgtttcctttaaggtcttccgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 catctccttgggaccgcctttcttaccactctcctgtccgtttcctttaaggtcttccgt 300
Query: 361 atcactgaggcattcaaaaaactcttcttcactatcactccaggaatcccaggacttccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atcactgaggcattcaaaaaactcttcttcactatcactccaggaatcccaggacttccc 240
Query: 421 tacttctcccttttccttctctgtatctctgagat 455
|||||||||||||||||||||||||||||||||||
Sbjct: 239 tacttctcccttttccttctctgtatctctgagat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 859
Length adjustment: 10
Effective length of query: 445
Effective length of database: 849
Effective search space: 377805
Effective search space used: 377805
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_l02.g1 MSMg01no377_l02.g1 CHROMAT_FILE:
MSMg01no377_l02.g1 PHD_FILE: MSMg01no377_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:58 2005
(464 letters)
>mm_chr1_129633849_129634713
Length = 865
Score = 760 bits (393), Expect = 0.0
Identities = 442/465 (95%), Gaps = 14/465 (3%)
Strand = Plus / Plus
Query: 1 attctatagaccaggctggccccaaactcagaaatccacctgcccctgcctcctgagagc 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgtagaccaggctagccccaaactcagaaatccacctgcccctgcctcctgagagc 260
Query: 61 ttggattaaaggcctgtgccaccaccaacaggcttcatacatgca-tttttacagcagac 119
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 261 ttggattaaaggcctgtgccaccaccaacaggcttcatacatgcattttttaaagcagac 320
Query: 120 catctgaggtggaaagacaacagatttgtgggaacaaagctaaattgtttctggagaatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctgaggtggaaagacaacagatttgtgggaacaaagctaaattgtttctggagaatc 380
Query: 180 aggactcactctctgcagttaccagtaataggatcttggctcaggaatccatggagggaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggactcactctctgcagttaccagtaataggatcttggctcaggaatccatggagggaa 440
Query: 240 atgctttgggttaatctatagtctagctttttgcaacagtgatatggtgaagtccatggt 299
||||||||||||||||| |||||| |||||||||||||||||||||||||| |
Sbjct: 441 atgctttgggttaatctctagtctggctttttgcaacagtgatatggtgaa--c------ 492
Query: 300 gaatgctgcttcaggctagtctactgggattccaaatgtgtgtcatggtgcccagctttt 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ----gctgcttcaagctagtctactgggattccaaatgtgtgtcatggtgcccagctttt 548
Query: 360 ttacataagttttcaggttcaatctcaggtcctctggcttatattacctgctgaactagc 419
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 549 ttacataagttttcaggttcaatctcaggtcctctggcttatattacccgttgaactagc 608
Query: 420 ccctcatcccaaaatttgactctaaactacaatttctaagaaaat 464
||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 609 ccctcatcccataatttgactctaaactacaatt-ctaagaaaat 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
