NCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAAATGAATCATGCAAGTAGAAAGGGGAAAACACCAGGCAAA
TATACAGCAACTGTGTAGACATGACCAATCAATAGATGCTAAAATCAATG
GGTATGAAATGGAGGACAGAAAGTTGGCTTCATGACCTTCAAGTCCCTTT
CTAGAAGCACTCACTGATTGCAAAGTGAAGTTTATCTGTTGATAAGGAGA
TGTGACAGAAACTACCTTAATCAGGAAGTCAAGATTAACATCATCAGAAA
AATGGAGCACTAAATCAACCCTTGGTGGGAGGTCCCAAGAACACATTATT
TCTGAGGCATTCTCGCCAAAACATACAAACAGACAGACAGACAACAAACC
CTATGACCCCACCAAAATATCAGGACACCTCAGACAGATCCAAACTATGT
GTTTAGTGTTTCTCAAAAGGGCCAAGAGGATGGGAGTCAAAGAAAGACAC
AGGAAGAAGAAAGGAAAACTAACCCAAAAAGCATAGAACCCTTCCTGTTA
TCCTAAATAATGAAGGTATGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGNNNGNNNNNTTTGTT
TNNGGGGNNNNTGNGATGGTTTTTTATTTTAGAGAATTTGTTTTTTAGGG
GGGAGATATGAAAGGTAAANAATATGTTATAAAAAGAAAATAAATNTTTG
GGGGTTTTTTTTTTTTATATAAAAGAATAGGTGG

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATCTTGAAAGAGAACCTGAGATTAT
GAGAATCCAAAATAATGGCACTTGGGTTTAAAAAGACAGGGAGATTGTGT
GAAGTGCAGAAAGTTCTGGTGAGACCAGGAGTTCAGTATTCTGCAAGCTC
CCAGGCCATATTAGTGCTTCAGGCTCAGGGGGCCAAACTTTTGAATAATT
TGGGGCTAAGCCATAGGATAATGGGAAGATTTTCTGTATGTGGGTAAAGA
AAGGAAGACGGTAGCAGTATGGAACGCAAGCATCCTGGATTCATTGCTTC
ATAGTTTTGCTGAGACGTTCTATCAGTGAGCTTTCCACTGCTGTGACACA
GCCTATGAGAAGCAAGGCTTACTTTCATGTGTTCAAAGGTTTCAACCCAT
CATCACGTGACTCTGTTGCTTGTGGGCTGCGGAGAGTGTGAGGTCCTTGT
GCTCAGAGATCTGCACTAGAGACACCAGGAATGTGAAACACACATGCTTC
TCTCTTCAACAGAAGGGATGTATATGCCCACTTTTTTACCCAGAAGGCTG
GGAGTGGATGTATTTAATAGTCTGGCTATCTGTGCTATCTGTAGGGTGGG
GCCACACCTGAATCCCCCCCCCCCCGAACATTAAATTTTATTTCAAATCT
TTCCCCTTATACCCTTATTCTTGAAACTGGCTTTTCCCAAAAAAAACCCA
CTCTCTTTGGGGGAGGCGTA

Query= MSMg01no378_l23.g1 MSMg01no378_l23.g1 CHROMAT_FILE:
MSMg01no378_l23.g1 PHD_FILE: MSMg01no378_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:18 2005
         (508 letters)



>mm_chr1_77184593_77185500
          Length = 908

 Score =  946 bits (489), Expect = 0.0
 Identities = 504/509 (99%), Gaps = 1/509 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcttgaaagagaacctgagattatgagaatccaaaataatggcacttgggtttaaaaag 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 781 atcttgaaagagaacctgagattatgagaatccaaactaatggcacttgggtttaaaaag 722

                                                                       
Query: 61  acagggagattgtgtgaagtgcagaaagttctggtgagaccaggagttcagta-ttctgc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 721 acagggagattgtgtgaagtgcagaaagttctggtgagaccaggagttcagtatttctgc 662

                                                                       
Query: 120 aagctcccaggccatattagtgcttcaggctcagggggccaaacttttgaataatttggg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagctcccaggccatattagtgcttcaggctcagggggccaaacttttgaataatttggg 602

                                                                       
Query: 180 gctaagccataggataatgggaagattttctgtatgtgggtaaagaaaggaagacggtag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctaagccataggataatgggaagattttctgtatgtgggtaaagaaaggaagacggtag 542

                                                                       
Query: 240 cagtatggaacgcaagcatcctggattcattgcttcatagttttgctgagacgttctatc 299
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagtatggaacacaagcatcctggattcattgcttcatagttttgctgagacgttctatc 482

                                                                       
Query: 300 agtgagctttccactgctgtgacacagcctatgagaagcaaggcttactttcatgtgttc 359
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgagctttctactgctgtgacacagcctatgagaagcaaggcttactttcatgtgttc 422

                                                                       
Query: 360 aaaggtttcaacccatcatcacgtgactctgttgcttgtgggctgcggagagtgtgaggt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaggtttcaacccatcatcacgtgactctgttgcttgtgggctgcggagagtgtgaggt 362

                                                                       
Query: 420 ccttgtgctcagagatctgcactagagacaccaggaatgtgaaacacacatgcttctctc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttgtgctcagagatctgcactagagacaccaggaatgtgaaacacacatgcttctctc 302

                                        
Query: 480 ttcaacagaagggatgtatatgcccactt 508
           || ||||||||||||||||||||||||||
Sbjct: 301 tttaacagaagggatgtatatgcccactt 273


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)