MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-379I19
Chromosome	1 (Build37)
Map Location	64,811,240 - 64,811,572
singlet/doublet	singlet
Overlap gene	none
Upstream gene	4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5
Downstream gene	9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775
Link	Open Mouse BAC browser

Click to get alignment info.

name	4933402D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74426 MGI:1921676
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC671842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	OTTMUSG00000013918 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433315 MGI:3649721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klf7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93691 MGI:1935151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps1_583.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:241074
definition	note : peptidyl-prolyl cis-trans isomerase A pseudogene 1_583.1 pseudo : _no_value

name	LOC100043124 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Creb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12912 MGI:88494
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2310038H17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67099 MGI:1914349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccnyl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227210 MGI:2138614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 83 ESTs, 9 Proteins

name	Fzd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14367 MGI:108571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	9430067K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241075 MGI:2443627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667245 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043141 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1083 ESTs, 11 Proteins

name	4921521F21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70861 MGI:1918111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667276 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667276
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins pseudo : _no_value

name	Cryge (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12968 MGI:88525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crygd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12967 MGI:88524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crygc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12966 MGI:88523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Crygb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12965 MGI:88522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654356 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654356
definition	note : malic enzyme, supernatant pseudogene pseudo : _no_value

name	Cryga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12964 MGI:88521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D630023F18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98303 MGI:2138198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Idh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15926 MGI:96413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pip5k3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18711 MGI:1335106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pthr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213527 MGI:2180917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042716 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG628894 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628894 MGI:3645967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100043165 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs pseudo : _no_value

name	LOC383520 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383520
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG667775 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667775 MGI:3643512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	4933402D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363466 GeneID:74426 MGI:1921676
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933402D24 gene transcript_id : XM_129823.4

name	OTTMUSG00000013918 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352005 GeneID:433315 MGI:3649721
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000013918 transcript_id : NM_001013800.2

name	Klf7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981435 GeneID:93691 MGI:1935151
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kruppel-like factor 7 (ubiquitous) transcript_id : NM_033563.2

name	Creb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82546875 GeneID:12912 MGI:88494
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cAMP responsive element binding protein 1 transcript_id : NM_009952.2

name	Creb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82546873 GeneID:12912 MGI:88494
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cAMP responsive element binding protein 1 transcript_id : NM_133828.2

name	2310038H17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372875 GeneID:67099 MGI:1914349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310038H17 gene transcript_id : NM_025964.3

name	Ccnyl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233915 GeneID:227210 MGI:2138614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 83 ESTs, 9 Proteins product : cyclin Y-like 1, transcript variant 2 transcript_id : XM_001001771.2

name	Fzd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111160872 GeneID:14367 MGI:108571
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frizzled homolog 5 (Drosophila) transcript_id : NM_001042659.1

name	Fzd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111160874 GeneID:14367 MGI:108571
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frizzled homolog 5 (Drosophila) transcript_id : NM_022721.3

name	9430067K14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87162467 GeneID:241075 MGI:2443627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9430067K14 gene transcript_id : NM_001039493.1

name	LOC100043141 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233916 GeneID:100043141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1083 ESTs, 11 Proteins product : similar to ribosomal protein L10a transcript_id : XM_001479716.1

name	4921521F21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801740 GeneID:70861 MGI:1918111
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921521F21 gene transcript_id : NM_027582.2

name	Cryge (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288885 GeneID:12968 MGI:88525
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma E transcript_id : NM_007777.3

name	Crygd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681038 GeneID:12967 MGI:88524
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma D transcript_id : NM_007776.1

name	Crygc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485690 GeneID:12966 MGI:88523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma C transcript_id : NM_001082573.1

name	Crygc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681036 GeneID:12966 MGI:88523
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma C transcript_id : NM_007775.1

name	Crygb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42733605 GeneID:12965 MGI:88522
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma B transcript_id : NM_144761.1

name	Cryga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40805837 GeneID:12964 MGI:88521
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma A transcript_id : NM_007774.3

name	D630023F18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379576 GeneID:98303 MGI:2138198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630023F18 gene transcript_id : NM_175293.3

name	Idh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037545 GeneID:15926 MGI:96413
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : isocitrate dehydrogenase 1 (NADP+), soluble transcript_id : NM_010497.2

name	Pip5k3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115529472 GeneID:18711 MGI:1335106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-3- phosphate/phosphatidylinositol 5-kinase, type III transcript_id : NM_011086.2

name	Pthr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625877 GeneID:213527 MGI:2180917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parathyroid hormone receptor 2 transcript_id : NM_139270.2

name	EG628894 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233877 GeneID:628894 MGI:3645967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG628894 transcript_id : XM_001478684.1

name	4933402D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82879321 GeneID:74426 MGI:1921676
definition	codon_start : 1 product : hypothetical protein LOC74426 protein_id : XP_129823.2

name	OTTMUSG00000013918 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701486 GeneID:433315 MGI:3649721
definition	codon_start : 1 product : hypothetical protein LOC433315 protein_id : NP_001013822.1

name	Klf7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981436 CCDS:CCDS15003.1 GeneID:93691 MGI:1935151
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Kruppel-like factor 7 (ubiquitous) protein_id : NP_291041.2

name	Creb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19745144 CCDS:CCDS15004.1 GeneID:12912 MGI:88494
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0008361 - regulation of cell size [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant B product : cAMP responsive element binding protein 1 isoform B protein_id : NP_034082.1

name	Creb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82546874 CCDS:CCDS15005.1 GeneID:12912 MGI:88494
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0008361 - regulation of cell size [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant A product : cAMP responsive element binding protein 1 isoform A protein_id : NP_598589.2

name	2310038H17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385458 CCDS:CCDS15006.1 GeneID:67099 MGI:1914349
definition	codon_start : 1 product : hypothetical protein LOC67099 protein_id : NP_080240.1

name	Ccnyl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363395 GeneID:227210 MGI:2138614
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001001771.1

name	Fzd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111160873 GeneID:14367 MGI:108571
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004926 - non-G-protein coupled 7TM receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0048469 - cell maturation [Evidence IMP]; GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : frizzled 5 precursor protein_id : NP_001036124.1

name	Fzd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059488 CCDS:CCDS15008.1 GeneID:14367 MGI:108571
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004926 - non-G-protein coupled 7TM receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0048469 - cell maturation [Evidence IMP]; GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : frizzled 5 precursor protein_id : NP_073558.2

name	9430067K14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87162468 CCDS:CCDS15009.1 GeneID:241075 MGI:2443627
definition	GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : hypothetical protein LOC241075 protein_id : NP_001034582.1

name	LOC100043141 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233917 GeneID:100043141
definition	codon_start : 1 product : similar to ribosomal protein L10a protein_id : XP_001479766.1

name	4921521F21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386240 GeneID:70861 MGI:1918111
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70861 protein_id : NP_081858.1

name	Cryge (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288886 GeneID:12968 MGI:88525
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 note : eye lens obsolescence product : crystallin, gamma E protein_id : NP_031803.3

name	Crygd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681039 GeneID:12967 MGI:88524
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : lens opacity 12 product : crystallin, gamma D protein_id : NP_031802.1

name	Crygc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681037 CCDS:CCDS15012.1 GeneID:12966 MGI:88523
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence TAS] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; gammaC-crystallin product : crystallin, gamma C isoform 1 protein_id : NP_031801.1

name	Crygc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:128485691 GeneID:12966 MGI:88523
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence TAS] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; gammaC-crystallin product : crystallin, gamma C isoform 2 protein_id : NP_001076042.1

name	Crygb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42733606 CCDS:CCDS15013.1 GeneID:12965 MGI:88522
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 note : nuclear opacity; gammaB-crystallin product : crystallin, gamma B protein_id : NP_658906.1

name	Cryga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6724317 CCDS:CCDS15014.1 GeneID:12964 MGI:88521
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 product : crystallin, gamma A protein_id : NP_031800.1

name	D630023F18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424962 CCDS:CCDS15015.1 GeneID:98303 MGI:2138198
definition	codon_start : 1 product : hypothetical protein LOC98303 protein_id : NP_780502.1

name	Idh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037546 CCDS:CCDS15016.1 GeneID:15926 MGI:96413
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016652 - oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor [Evidence IEA] GO_process : GO:0006749 - glutathione metabolism [Evidence IMP]; GO:0006097 - glyoxylate cycle [Evidence IEA]; GO:0006092 - main pathways of carbohydrate metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IDA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : isocitrate dehydrogenase 1 (NADP+), soluble protein_id : NP_034627.2

name	Pip5k3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115529473 GeneID:18711 MGI:1335106
definition	GO_component : GO:0012506 - vesicle membrane [Evidence IDA] GO_function : GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IEA] [Evidence IDA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] [Evidence IDA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] [Evidence IDA] codon_start : 1 note : PtdIns(4)P-5-kinase; FYVE finger-containing phosphoinositide kinase; phosphatidylinositol-4-phosphate 5-kinase, type III product : 1-phosphatidylinositol-4-phosphate 5-kinase protein_id : NP_035216.2

name	Pthr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29293832 CCDS:CCDS15017.1 GeneID:213527 MGI:2180917
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : parathyroid hormone receptor 2 protein_id : NP_644676.1

name	EG628894 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233878 GeneID:628894 MGI:3645967
definition	codon_start : 1 product : similar to nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein_id : XP_001478734.1

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 1 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 2 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 3 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 4 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 5 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 6 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 7 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 8 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 9 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 10 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 11 pseudo : _no_value

name	LOC671842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671842
definition	number : 12 pseudo : _no_value

name	LOC100043124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043124
definition	number : 1 pseudo : _no_value

name	LOC667245 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667245
definition	number : 1 pseudo : _no_value

name	LOC100042716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042716
definition	number : 2 pseudo : _no_value

name	LOC100042716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042716
definition	number : 1 pseudo : _no_value

name	LOC383520 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383520
definition	number : 1 pseudo : _no_value

name	EG667775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667775
definition	number : 1 pseudo : _no_value

name	EG667775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667775
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128868
definition	standard_name : D1Mit5

name	(CDS detail)
type	STS
link
xref	UniSTS:128655
definition	standard_name : D1Mit300

name	(CDS detail)
type	STS
link
xref	UniSTS:128846
definition	standard_name : D1Mit480

name	(CDS detail)
type	STS
link
xref	UniSTS:124144
definition	standard_name : 35.MMHAP4FRD11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:248655
definition	standard_name : BE117203

name	(CDS detail)
type	STS
link
xref	UniSTS:209729
definition	standard_name : RH126692

name	(CDS detail)
type	STS
link
xref	UniSTS:128459
definition	standard_name : D1Mit125

name	(CDS detail)
type	STS
link
xref	UniSTS:122884
definition	standard_name : 07.MMHAP29FLC1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:162805
definition	standard_name : RH126093

name	(CDS detail)
type	STS
link
xref	UniSTS:272117
definition	standard_name : PMC22515P1

name	(CDS detail)
type	STS
link
xref	UniSTS:160915
definition	standard_name : RH118240

name	(CDS detail)
type	STS
link
xref	UniSTS:165082
definition	standard_name : AV083133

name	(CDS detail)
type	STS
link
xref	UniSTS:165081
definition	standard_name : AI464204

name	(CDS detail)
type	STS
link
xref	UniSTS:234143
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:458906
definition	standard_name : stSG629994

name	(CDS detail)
type	STS
link
xref	UniSTS:234144
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178403
definition	standard_name : AW554339

name	(CDS detail)
type	STS
link
xref	UniSTS:158800
definition	standard_name : AI427138

name	(CDS detail)
type	STS
link
xref	UniSTS:158801
definition	standard_name : AI449570

name	(CDS detail)
type	STS
link
xref	UniSTS:128683
definition	standard_name : D1Mit325

name	(CDS detail)
type	STS
link
xref	UniSTS:161123
definition	standard_name : RH124301

name	(CDS detail)
type	STS
link
xref	UniSTS:224619
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158799
definition	standard_name : AI451536

name	(CDS detail)
type	STS
link
xref	UniSTS:224362
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:119836
definition	standard_name : RH94588

name	(CDS detail)
type	STS
link
xref	UniSTS:141409
definition	standard_name : Crygf

name	(CDS detail)
type	STS
link
xref	UniSTS:224591
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:141408
definition	standard_name : Crygd

name	(CDS detail)
type	STS
link
xref	UniSTS:220651
definition	standard_name : RH138564

name	(CDS detail)
type	STS
link
xref	UniSTS:259204
definition	standard_name : Crygc

name	(CDS detail)
type	STS
link
xref	UniSTS:256369
definition	standard_name : Crygc

name	(CDS detail)
type	STS
link
xref	UniSTS:141407
definition	standard_name : Crygb

name	(CDS detail)
type	STS
link
xref	UniSTS:259203
definition	standard_name : Crygb

name	(CDS detail)
type	STS
link
xref	UniSTS:158803
definition	standard_name : AI314969

name	(CDS detail)
type	STS
link
xref	UniSTS:222787
definition	standard_name : RH140721

name	(CDS detail)
type	STS
link
xref	UniSTS:158802
definition	standard_name : AI314845

name	(CDS detail)
type	STS
link
xref	UniSTS:178404
definition	standard_name : AI788952

name	(CDS detail)
type	STS
link
xref	UniSTS:273339
definition	standard_name : PMC55400P2

name	(CDS detail)
type	STS
link
xref	UniSTS:224346
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128685
definition	standard_name : D1Mit327

name	(CDS detail)
type	STS
link
xref	UniSTS:129637
definition	standard_name : D3Mit217

name	(CDS detail)
type	STS
link
xref	UniSTS:158015
definition	standard_name : GDB:595139

name	(CDS detail)
type	STS
link
xref	UniSTS:224425
definition

name	LOC667276 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233918 GeneID:667276
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins product : hypothetical LOC667276 pseudo : _no_value transcript_id : XR_034352.1

name	LOC100043165 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233919 GeneID:100043165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100043165 pseudo : _no_value transcript_id : XR_034376.1

clone name	MSMg01-353N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-547F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-105O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-056P05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-060A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348L11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-379I19.T7 (MSMg01no379_i19.b1)	MSMg01-379I19.TJ (MSMg01no379_i19.g1)
ACC	AG484135	AG484136
length	735	840
length of high quality (start - end)	442 (63 - 504)	145 (71 - 215)
definition	CHROMAT_FILE: MSMg01no379_i19.b1 PHD_FILE: MSMg01no379_i19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:20:20 2005	CHROMAT_FILE: MSMg01no379_i19.g1 PHD_FILE: MSMg01no379_i19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:20:21 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCT CTGATTTCACCGTCTTACTTTTATACAGCTGTGATAAAACACCATGCCCG TAAAAGAAAGCATTTAATTGGGGGCCTAAGGTTTCTGGGGGTTACAATCC AAGATGGCTGAGCAAGGACAGCTGCAGGTACAGCTAAGTGCTTACACCTT CATTGGCAACTTAGAGACAGGAAGAGTCACTGGGAATGGCCTGCCACCCC AGGACACACCTCTTTTAACAAGGAAACACCCCCAATCCTTCCTAAACCGT TCCACCAACTGGGGATCAAATATTTAAAGCTTTGAGTCTGTGGAGGTGGG TATTTCCTTCAAACGACCACAGTCAGTCTATAATAACTCTCCCTTACTCC TGATGCTTTTTCTTAGCAACTTCCCCACCACTGTGCTCCACTCTCTTCCT CTGTTATAGTCTACTTTGCCCTTCTTAGTGTTGGGATTGGAACTGTCCCT CTTCCCAAGACAGTGACCCATAACAGGTGGTGATGGCTACCTCTTCATGA AGCCTCTCTTCCCATCTCCAATAAGTGTGGCAGGTAAACATTCCCTTTCA CTCTGTTTTCTCCTCCTCCCCCTCCTTCTTTCCCTTCTTCCTTTCCTTTT TTTCTTTTTTCTGGCTTTCTGTTTTCTGGTTTCTCGAAACTACCTTTCCT TGTTTCAACCTGCACCATTCTTACTTTCCTTTATT	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXTTTACTTATTTTCTGTATATAAGTACACTG CAGCTATCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGCCC CTTTTTAAGTTTTAAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTTTTTNNTTTTTTNTTTTTTTTTTTTTTTTTTTNTTT TTNTTTTTTTTTTTTTTTNGTGGGTGGTGTTTGTTTTTGTTTTTTTTTTC GGTGTTTTGTTTTTTTTTTTTTTTTTCTTCGTCTCTTTTTTTTGTTGGTG GGGTTTTTTTTTTTTTTTTTTTTTTTTCTCGGCGGCGTTTTTTCCTTTTC CCTTTTTTTCGTTTTTTTTCCCCTTTCTCCTTTTTTCCTCCTTTTCGCCG TTTTCCCCTCCCTTTTTCTTCTTTCCTTTTTCTTCCCTTCTTCTTTTTTC TTTCCCTTTCTTTTTTCCCTTTTTCCGTCGTTTTTCCCGTTTTTCGTTCT CTCTCCCCTTTTTTTTTTTCTTTCTTTTTCCCCTCCTGTTGTTTTTCTTC TTTTCCCCCCTCCCTTCCCCTCTCTTTTTTTTTTTCCTCTCCCCCCCCCT TTCGTTTCTTTCCGGTTTTTTTTTTTTCGCCGTTCCCCGCCCCCGCCGTT TTTTGTATCTTTTTTTTTTCCTTCACTTTTTTCCTGTGCGCGCCTCCTTT GTTTTCCCGTGTTTCCTTTTCTTCTTTTTTCCCCCCCTCTTTCCCTCCTT TTTCCTTCGCCTTTTTTTTACCTATTTTTCTTTCATTAAT
quality values	Open. Hide. 12 12 13 14 27 28 35 31 28 18 18 10 10 10 16 16 26 27 37 30 21 25 19 19 10 13 12 18 20 18 19 12 13 13 15 15 19 24 24 30 36 47 43 19 17 17 28 29 29 59 59 37 27 21 14 10 12 9 9 9 12 11 12 15 28 32 40 41 48 41 47 47 47 33 34 30 30 30 37 43 48 36 34 34 36 36 42 48 48 48 42 42 37 36 41 41 57 57 57 48 48 48 48 48 57 47 43 43 43 48 57 57 57 57 57 47 47 47 57 46 43 43 43 47 47 48 59 48 48 48 57 57 57 57 57 57 57 57 57 57 57 57 47 47 43 47 57 50 50 47 47 47 47 47 50 41 50 57 43 50 33 38 28 43 43 52 57 57 57 57 57 52 52 43 43 39 43 43 57 57 59 52 52 52 47 47 39 43 43 59 47 57 57 57 57 57 57 57 57 57 52 52 52 57 52 52 52 52 57 57 38 38 24 15 12 24 24 39 43 43 57 57 52 52 45 43 43 52 52 52 43 43 43 43 52 57 43 43 28 28 22 38 34 42 39 33 33 35 34 38 32 43 43 57 43 43 43 43 43 57 57 59 59 57 57 57 52 52 52 52 52 52 52 52 52 57 52 52 52 52 52 52 52 43 50 43 43 52 59 48 48 43 44 44 46 44 43 44 43 43 44 57 44 44 44 46 44 48 44 34 32 12 12 12 12 18 12 13 13 15 24 32 36 44 44 47 44 47 47 48 46 44 39 43 37 41 32 31 31 20 20 20 31 26 29 19 19 19 24 24 30 39 42 43 48 48 43 37 31 23 22 20 20 28 28 35 39 32 30 20 20 20 22 23 23 28 24 28 32 37 25 17 10 10 10 17 22 37 59 59 59 47 48 48 48 48 48 43 47 37 37 37 43 43 50 48 48 48 48 48 59 48 43 29 14 12 8 8 15 24 43 46 43 43 36 37 28 28 28 29 36 44 44 44 30 32 24 36 22 23 23 20 20 21 21 28 25 25 22 32 30 18 18 12 12 11 18 15 20 23 28 33 42 42 35 35 35 35 35 39 36 36 36 40 30 31 25 25 16 18 14 13 10 10 12 16 21 23 28 28 28 30 22 20 18 18 18 21 35 37 39 39 24 10 10 10 10 10 11 20 19 19 12 9 9 13 12 8 8 8 8 10 15 13 20 15 15 13 10 10 10 18 24 25 19 22 28 31 32 26 26 16 12 12 15 16 18 15 15 10 10 10 10 9 12 9 8 8 19 19 23 20 22 16 15 10 10 10 13 10 15 13 10 9 10 10 10 10 12 17 19 16 10 10 15 13 10 9 14 22 25 24 14 9 9 9 12 9 9 9 9 17 19 30 22 17 13 10 10 10 14 13 20 20 33 28 28 28 23 19 19 12 12 10 10 15 19 12 8 11 10 10 10 15 23 26 37 25 28 22 16 14 11 9 9 9 9 9 10 17 13 10 11 10 11 10 16 13 11 10 10 10 10 10 8 7 7 8 8 12 12 8 11 9 10 10 10 10 10 19 11 10 8 8 8 8 8 10 12 10 10 10 10 13 9 11 13 10 8 8 8 8 8 10 9 8 8 8 8 8 8 11 11 10 9 12 8 8 8 9 9 9 9 10 14 14 15 18 20 21 19 11 11 11 11	Open. Hide. 6 8 8 10 11 10 14 12 22 24 34 37 39 43 41 39 39 39 36 39 44 41 21 27 12 9 9 7 9 9 8 15 19 14 14 14 27 28 30 25 23 24 37 30 30 30 33 33 33 37 37 37 37 23 27 11 10 11 11 11 14 23 23 36 25 28 28 31 31 36 48 57 57 53 53 53 53 53 53 57 59 57 50 50 50 53 53 59 68 68 68 68 68 51 47 42 42 41 50 48 50 50 68 68 68 68 68 68 51 51 47 47 47 47 47 47 47 57 57 47 57 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 48 48 47 47 37 33 24 21 19 20 20 15 13 3 0 0 3 6 6 8 10 3 0 3 10 11 10 10 8 6 6 6 6 6 8 7 9 12 12 7 7 3 0 3 7 7 8 3 0 3 8 8 8 8 8 10 10 10 9 9 9 9 9 3 0 3 9 9 11 11 18 10 10 10 10 10 18 11 11 11 12 11 6 8 6 6 13 12 10 10 8 8 8 17 11 10 7 7 7 8 8 8 8 8 8 9 9 23 21 16 15 19 26 19 33 17 8 10 8 19 13 13 13 12 15 9 9 8 8 13 13 16 11 11 13 19 13 13 8 8 8 6 6 6 6 6 6 6 9 9 15 15 14 11 11 11 9 9 10 16 10 8 8 8 8 10 19 16 10 12 12 10 10 9 8 8 8 8 6 6 8 6 9 9 12 15 19 15 11 11 11 21 25 19 20 20 23 12 14 10 11 16 19 15 11 6 6 8 12 13 10 8 9 8 8 8 11 15 15 12 19 10 8 8 8 8 10 26 26 20 16 14 11 10 10 11 10 12 10 9 12 8 10 10 10 10 10 21 17 10 10 10 8 8 8 8 8 10 10 9 8 8 8 15 8 12 8 8 8 8 8 9 10 17 17 8 9 9 16 10 13 13 15 15 19 19 20 20 24 15 11 11 11 9 8 10 10 10 14 18 23 18 12 15 8 8 8 8 10 11 17 19 14 12 12 14 12 18 9 6 6 6 8 8 8 8 8 11 17 23 16 8 8 6 7 10 19 22 19 11 6 6 8 8 9 9 10 14 13 16 11 10 10 12 14 15 13 17 18 14 10 10 10 10 15 30 19 15 14 14 14 13 16 24 13 12 12 10 10 8 8 8 8 6 6 6 6 6 10 17 15 14 9 11 10 14 16 17 17 10 9 9 9 9 14 12 10 8 8 10 16 24 22 10 10 8 10 8 8 10 16 22 19 19 17 16 19 13 11 12 10 10 13 13 11 10 9 15 19 23 23 23 19 19 21 22 10 12 10 10 10 15 8 8 8 13 8 8 8 8 8 8 11 15 22 17 9 9 9 9 17 13 12 8 8 8 8 9 10 10 11 12 11 11 11 11 12 12 12 11 8 8 8 8 8 15 25 23 14 6 6 6 6 8 12 18 21 21 17 17 22 21 16 16 9 8 8 8 8 8 8 9 16 13 14 13 9 8 10 11 10 10 8 10 8 8 8 8 8 8 12 12 13 12 11 9 11 11 8 13 8 8 8 8 10 9 9 8 10 8 10 8 8 9 11 9 9 9 9 9 9 15 11 9 9 9 9 12 28 18 18 8 10 8 8 8 9 10 14 14 18 10 9 9 9 10 17 17 10 14 9 8 8 8 8 8 8 8 8 15 21 29 23 23 11 9 9 8 8 8 8 9 8 8 10 10 10 14 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no379_i19.b1 MSMg01no379_i19.b1 CHROMAT_FILE:
MSMg01no379_i19.b1 PHD_FILE: MSMg01no379_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:20 2005
         (442 letters)



>mm_chr1_64810731_64811572
          Length = 842

 Score =  621 bits (321), Expect = 0.0
 Identities = 330/333 (99%)
 Strand = Plus / Minus

                                                                       
Query: 110 ctgcaggtacagctaagtgcttacaccttcattggcaacttagagacaggaagagtcact 169
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 842 ctgcaggtacagctaagtgcttacaccttcattggcaacttagagataggaagagtcact 783

                                                                       
Query: 170 gggaatggcctgccaccccaggacacacctcttttaacaaggaaacacccccaatccttc 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gggaatggcctgccaccccaggacacacctcttttaacaaggaaacacccccaatccttc 723

                                                                       
Query: 230 ctaaaccgttccaccaactggggatcaaatatttaaagctttgagtctgtggaggtgggt 289
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ctaaaccgttccaccaactggggatcaaatatttaaagctttgagtctgtggaggtgggt 663

                                                                       
Query: 290 atttccttcaaacgaccacagtcagtctataataactctcccttactcctgatgcttttt 349
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 662 atttccttcaaacgaccacagtcagtctataaaaactctcccttactcctgatgcttttt 603

                                                                       
Query: 350 cttagcaacttccccaccactgtgctccactctcttcctctgttatagtctactttgccc 409
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cttagtaacttccccaccactgtgctccactctcttcctctgttatagtctactttgccc 543

                                            
Query: 410 ttcttagtgttgggattggaactgtccctcttc 442
           |||||||||||||||||||||||||||||||||
Sbjct: 542 ttcttagtgttgggattggaactgtccctcttc 510


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information