Query= MSMg01no381_d19.b1 MSMg01no381_d19.b1 CHROMAT_FILE:
MSMg01no381_d19.b1 PHD_FILE: MSMg01no381_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:34 2005
(467 letters)
>mm_chr1_94784085_94784950
Length = 866
Score = 818 bits (423), Expect = 0.0
Identities = 452/463 (97%), Gaps = 5/463 (1%)
Strand = Plus / Minus
Query: 7 gaattcagggaagg--tccggggcctgaaaactggttagacctttgacctttccaaggaa 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaattcagggaaggaat--ggggcctgaaaactggttagacctttgacctttccaaggaa 412
Query: 65 agccatggaaacttgcactgccctgccatatctgaagataccctggggtatggagggtgt 124
||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 411 agccatggaaacttgcactgccc-accatatttgaagataccctggggtatggatggtgt 353
Query: 125 gctgggaaaatcagcagccacctggggaaaactgttaaccctaaaagtttaatactcaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gctgggaaaatcagcagccacctggggaaaactgttaaccctaaaagtttaatactcaag 293
Query: 185 aatcttctacaattcttacatccttaaacatggcctgcagatgccagtggacattttaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aatcttctacaattcttacatccttaaacatggcctgcagatgccagtggacattttaga 233
Query: 245 attaattgatgggcgccaatgacttttccatttatctactcatccatccatctatccacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 attaattgatgggcgccaatgacttttccatttatctactcatccatccatctatccacc 173
Query: 305 catccatccacctatacaccttctttcctgacccatcaatcagttcattcattcacccac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 catccatccacctatacaccttctttcctgacccatcaatcagttcattcattcacccac 113
Query: 365 tcatctatcctttcacccgtgcaaccacacttacatctatccacccatctacccatccat 424
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tcatctatcctttcacccgggcaaccacacttacatctatccacccatctacccatccat 53
Query: 425 ctattcactctctgtaccctcttatcctctccatctacactgc 467
||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 52 ctattcactctctgtacccacttaccctctccatctacactgc 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 866
Length adjustment: 10
Effective length of query: 457
Effective length of database: 856
Effective search space: 391192
Effective search space used: 391192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_d19.g1 MSMg01no381_d19.g1 CHROMAT_FILE:
MSMg01no381_d19.g1 PHD_FILE: MSMg01no381_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:34 2005
(442 letters)
>mm_chr1_94575558_94576398
Length = 841
Score = 847 bits (438), Expect = 0.0
Identities = 441/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 1 aaggatggttcaaagttaagacgtctatgaaattcatatatttaagggttaaaaaggaag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 aaggatggttcaaagttaagacgtctatgaaattcatatatttaaggg-taaaaaggaag 259
Query: 61 aaaacacgcatccattgaagccattttagagccagtcaaaagctgtctgtgaaccaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaacacgcatccattgaagccattttagagccagtcaaaagctgtctgtgaaccaaacc 319
Query: 121 cacatcaaaagtggatggagtggatgaattagtgatagacgttcctcggaacggcctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cacatcaaaagtggatggagtggatgaattagtgatagacgttcctcggaacggcctggg 379
Query: 181 aagcagccatcggagagaattagatagatccctatgtcctacatgggaagaatttcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagcagccatcggagagaattagatagatccctatgtcctacatgggaagaatttcagca 439
Query: 241 tcaattattaaatgaaaatagaaagctgaaaggcaggagtatattaatatctaaatacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaattattaaatgaaaatagaaagctgaaaggcaggagtatattaatatctaaatacat 499
Query: 301 gagacataaatatgaataaagtattttatgtatttatataaatatggtgcataatttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gagacataaatatgaataaagtattttatgtatttatataaatatggtgcataatttatg 559
Query: 361 tataaattatgtatgtataattcacaaacaattgatacataacacaagatgtaatttaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tataaattatgtatgtataattcacaaacaattgatacataacacaagatgtaatttaca 619
Query: 421 tctataatttatacataagcat 442
||||||||||||||||||||||
Sbjct: 620 tctataatttatacataagcat 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
