Query= MSMg01no382_d09.b1 MSMg01no382_d09.b1 CHROMAT_FILE:
MSMg01no382_d09.b1 PHD_FILE: MSMg01no382_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:53 2005
(502 letters)
>mm_chr1_154764147_154765054
Length = 908
Score = 820 bits (424), Expect = 0.0
Identities = 476/508 (93%), Gaps = 26/508 (5%)
Strand = Plus / Plus
Query: 1 ccatgcctagttttacttggagttatttccagtatggattctaaaccagcagt-ga---- 55
||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct: 201 ccatgcctagttttactcggagttatttccagtatggatactaaaccagcagtggacgtg 260
Query: 56 -acgatgcttaagaactaagcaagcttggcgttgaagtgtggcctcattccttcccagat 114
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 261 gacgatgcttaagaactaagcaagcttggcgttgaagtatggcctcattccttcacagat 320
Query: 115 gtgggccttcaacgttctggacatttcacaagatttaaatttcatttgcagtaaaaatgt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggccttcaacgttctggacatttcacaagatttaaatttcatttgcagtaaaaatgt 380
Query: 175 accttagctcccttgggtagcccttgtgacctggtttcactttgtcacttgcccaaggat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttagctcccttgggtagcccttgtgacctggtttcactttgtcacttgcccaaggat 440
Query: 235 cctcaggaaccgccctcaggaatcctcagaagccaccaaaaccataaaaaaagattatgg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcaggaaccgccctcaggaatcctcagaagccaccaaaaccataaaaaaagattatgg 500
Query: 295 taaggacacttcagtgtgactctgaagagcctgtgtccatgcttggtgtgtactatcctt 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 taaggacacttcagtgtgactctgaagagcctgtgtccatgcttggtgtgtactctcctt 560
Query: 355 tctctcagtgcctgtctttttattaatccctctgattaaatctacattaaggtttcaact 414
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcactcagtgcctgtctttttattaatccctctgattaaatctacattaaggtttcaact 620
Query: 415 aataaccaccaggtgattattagatgcacacacacacacacacacacacacacactcttg 474
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 aataaccaccaggtgattattagatgcacacacacacac----------------tctt- 663
Query: 475 cttccgatgactcattgtgaaattcttt 502
|||||||||||||||||||||||||
Sbjct: 664 ---ccgatgactcattgtgaaattcttt 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 908
Length adjustment: 10
Effective length of query: 492
Effective length of database: 898
Effective search space: 441816
Effective search space used: 441816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_d09.g1 MSMg01no382_d09.g1 CHROMAT_FILE:
MSMg01no382_d09.g1 PHD_FILE: MSMg01no382_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:53 2005
(220 letters)
>mm_chr1_154888708_154889327
Length = 620
Score = 383 bits (198), Expect = e-111
Identities = 201/202 (99%)
Strand = Plus / Minus
Query: 1 tcttgacctggagatgtggatgaaggagaggatccaggagctggaggcttggaggttgtg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcttgacctggagatgtgaatgaaggagaggatccaggagctggaggcttggaggttgtg 316
Query: 61 cttctcatgtgcagagagtgcaataaaccaagacgctaaggctctagagctcagttctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cttctcatgtgcagagagtgcaataaaccaagacgctaaggctctagagctcagttctag 256
Query: 121 aacattggctggatcaacaggcaccgtttatgttggatggtctctgggaggtagcgtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aacattggctggatcaacaggcaccgtttatgttggatggtctctgggaggtagcgtgtg 196
Query: 181 tgtgtgtgtgtgtgtgtgtgtg 202
||||||||||||||||||||||
Sbjct: 195 tgtgtgtgtgtgtgtgtgtgtg 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
