Query= MSMg01no382_e09.b1 MSMg01no382_e09.b1 CHROMAT_FILE:
MSMg01no382_e09.b1 PHD_FILE: MSMg01no382_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:58 2005
(322 letters)
>mm_chr1_168365878_168366599
Length = 722
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%)
Strand = Plus / Minus
Query: 5 gaattcaaagattattcctacacagacacagcctcacctgccaacttacagccttctgtt 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaattcaaagattactcatacacagacacagcctcacctgccaacttacagccttctgtt 421
Query: 65 ctgctggtctctccacctcccaatacaaaaggaaaccactttatgataaatgtgtcctta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctgctggtctctccacctcccaatacaaaaggaaaccactttatgataaatgtgtcctta 361
Query: 125 ttgtcctggggagaaaacttaagttttagaatgtggtcgaacagttgtaaacttggaagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttgtcctggggagaaaacttaagttttagaatgtggtcgaacagttgtaaacttggaagc 301
Query: 185 caaatcagcctggtccttggcttagttccttctcaagcatgaggaaaaggcagaaaggta 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 300 caaatcagcctggtccttggcttagttccttctcaagcatgaagaaaaggcagaaaggta 241
Query: 245 aagaagctatgcaaaaccatttgcatccttaaaatgttgtgtgtgtgtgtgtgtgtgtgt 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 240 aagaagctatgcaaaaccatttgcatccttaaaatggtgtgtgtgtgtgtgtgtgtgtgt 181
Query: 305 gtgtgtgtgt 314
||||||||||
Sbjct: 180 gtgtgtgtgt 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_e09.g1 MSMg01no382_e09.g1 CHROMAT_FILE:
MSMg01no382_e09.g1 PHD_FILE: MSMg01no382_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:58 2005
(424 letters)
>mm_chr1_168174892_168175715
Length = 824
Score = 806 bits (417), Expect = 0.0
Identities = 423/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 1 cagacaaagggaacgggatacacaaagactcagatgataccaatctggccatttcctcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagacaaagggaacgggatacacaaagactcagatgataccaatctggccatttcctcgg 260
Query: 61 tacagacgaaagcctccttgccaggggtattgcgattctattcaggtagagaatggtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacagacgaaagcctccttgccaggggtattgcgattctattcaggtagagaatggtgtt 320
Query: 121 tgttgaggttgtaataaacgaatggggacttgggtgtgtccattatgaggaattcaaact 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tgttgaggttgtaataaacgaatggggacttgggtgtgttcattatgaggaattcaaact 380
Query: 181 gtaacctcaataaaatggtcatttaggagttttattttatattattttaattgatagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaacctcaataaaatggtcatttaggagttttattttatattattttaattgatagaat 440
Query: 241 gcaaacatttattgtatacacacatgctgttttgatatatgtacacaccatggaatggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaacatttattgtatacacacatgctgttttgatatatgtacacaccatggaatggct 500
Query: 301 aaaattgagctaattaacgtatacctgtgtactttttttttttttttt-gtggtgagaac 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 aaaattgagctaattaacgtatacctgtgtactttttttttttttttttgtggtgagaac 560
Query: 360 accttaagtctccctttaaaactgcattcatttgtttggtgtggggatgcgcatgcgcca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accttaagtctccctttaaaactgcattcatttgtttggtgtggggatgcgcatgcgcca 620
Query: 420 gtgtg 424
|||||
Sbjct: 621 gtgtg 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
