Query= MSMg01no382_g09.b1 MSMg01no382_g09.b1 CHROMAT_FILE:
MSMg01no382_g09.b1 PHD_FILE: MSMg01no382_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:08 2005
(601 letters)
>mm_chr1_149145573_149146575
Length = 1003
Score = 1123 bits (581), Expect = 0.0
Identities = 594/599 (99%), Gaps = 2/599 (0%)
Strand = Plus / Plus
Query: 5 gaattcatctgttgtaccgtttttgccagattcatctcatgagagagctaaccagaaatg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctgttgtacagtttttgccagattcatctcatgagagagctaaccagaaatg 264
Query: 65 atttcaaga--caaaaatacaagaaaacacagagtacccattattatagttatttttctc 122
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttcaagagacaaaaatacaagaaaacacagagtacccattattatagttatttttctc 324
Query: 123 tgtaaaatagctggcattattacagaacatgatcttttacttctgctttacttttgaata 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtaaaatagctggcattattacagaacatgatcttttacttctgctttacttttgaata 384
Query: 183 ggtgtaacctctgctctaattcacactaattactactaagagtttgacactgttccaatc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgtaacctctgctctaattcacactaattactactaagagtttgacactgttccaatc 444
Query: 243 atatttgtataataatttgatccacacaactatattgccagagagcatggctcacatgta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atatttgtataataatttgatccacacaactatattgccagagagcatggctcacatgta 504
Query: 303 gtagagaaattcaggcacaaatattatttaaagagataccaagaggaagatatctacaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtagagaaattcaggcacaaatattatttaaagagataccaagaggaagatatctacaga 564
Query: 363 gagaactaaatcaaaagacagtgcaccccataatcagcatccaaacgctgacaccactgc 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 gagaactaaatcaaaagacagtgcaccccataatcagcatccaaacgctgacaccattgc 624
Query: 423 atacactagcaagattttattgaaaggacccagatgtagctgtctcttgtgagactatgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atacactagcaagattttattgaaaggacccagatgtagctgtctcttgtgagactatgc 684
Query: 483 cggggcctagcaaacacagaagtggatgctcacagtcagctaatggatggatcatagggc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cggggcctagcaaacacagaagtggatgctcacagtcagctaatggatggatcatagggc 744
Query: 543 tcccaatggaggagctagagaaagtagccaaggagctaaagggatctgcaaccctatag 601
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 745 tcccaatggaggagctagagaaagtacccaaggagctaaagggatctgcaaccctatag 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1003
Length adjustment: 10
Effective length of query: 591
Effective length of database: 993
Effective search space: 586863
Effective search space used: 586863
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_g09.g1 MSMg01no382_g09.g1 CHROMAT_FILE:
MSMg01no382_g09.g1 PHD_FILE: MSMg01no382_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:08 2005
(525 letters)
>mm_chr1_149304121_149305045
Length = 925
Score = 716 bits (370), Expect = 0.0
Identities = 382/386 (98%)
Strand = Plus / Minus
Query: 1 agcagagtatttttgctgaaaataggctaaattgctggtagagacttgagaaatacagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agcagagtatttttgctgaaaataggctaaattgctggtagagacttgagaaatacagtg 327
Query: 61 gaattattttataggaaacaggaaaaataattttgagatgtcatttataagaatagaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaattattttataggaaacaggaaaaataattttgagatgtcatttataagaatagaagt 267
Query: 121 agtagcaagggccaatgatatttaaggggaaattatcattaacattggaaatggaaaatg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 266 agtagcaagggccaatgatatttgaggggaaattatcattaacattggaaatggaaaatg 207
Query: 181 ttaatctgttgtgaatatggttcaatgcttgtcatatgttaattaagttcccaaatttac 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ttaatccgttgtgaatatggttcaatgcttgtcatatgttaattaagttcccaaatttac 147
Query: 241 atgagaatcccacgtgtaagatgctgagggtttcctgcccccagttggtttcacttggtg 300
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 146 atgagaatcccacgtgtaggatgctgagggtttcctgccctcagttggtttcacttggtg 87
Query: 301 aataaagttgccagcagctaatgattggtaaggagatagagacaggaatctaggatccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aataaagttgccagcagctaatgattggtaaggagatagagacaggaatctaggatccat 27
Query: 361 aggcatgtggactgtgttacttacag 386
||||||||||||||||||||||||||
Sbjct: 26 aggcatgtggactgtgttacttacag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
