Query= MSMg01no383_d23.b1 MSMg01no383_d23.b1 CHROMAT_FILE:
MSMg01no383_d23.b1 PHD_FILE: MSMg01no383_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:16 2005
(470 letters)
>mm_chr1_132647871_132648740
Length = 870
Score = 785 bits (406), Expect = 0.0
Identities = 447/470 (95%), Gaps = 15/470 (3%)
Strand = Plus / Plus
Query: 1 actactcttaggatacagaccaaaatatcttttttctaaattacatctatctatttattt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actactcttaggatagagaccaaaatatcttttttctaaattacatctatctatttattt 260
Query: 61 gtgtactgcacatgctgtaggacatacacagaagtaggagcacactttagggatagaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtactgcacatgctgtaggacatacacagaagtaggagcacactttagggatagaact 320
Query: 121 caggtcatcagacttgacactaagtacctcaactcactgaaccatcttactgatcccaga 180
|||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||
Sbjct: 321 caggtcatcagacttgacaccaagtacctccactcactgaaccatctcactgatcccaga 380
Query: 181 ttaaaactcgtaaacaccgactccaaactgtgtaagttccagtataacctgccttttccc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttaaaactcgtaaacaccgactccaaactgtgtaagttccagcataacctgccttttccc 440
Query: 241 tcctcagttgcaatcatctttctagtttacagaactgtatgcttcctccaaaagcatttg 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctcagttgcaatcacctttctagtttacagaactgtatgcttcctccaaaagcatttg 500
Query: 301 ctcatagatattttgctaacgtcaatgccattgttagacagagctccgtaggatgagcaa 360
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 501 ctcatagatattttgctaacgtcaatgccactgttagacagagctccataggatgagcaa 560
Query: 361 gcaatgccgtattactccatattgctcagcactctgcatgacgtaagcacacagtgacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaatgccgtattactccatattgctcagcactctgcatgacgtaagcacacagtgacat 620
Query: 421 ctgttgaacaacacatgattaaatagggtgcagtgtgctacaaaaggtca 470
||||||||||||| ||||||||||||||||||||||
Sbjct: 621 ctgttgaacaaca---------------tgcagtgtgctacaaaaggtca 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_d23.g1 MSMg01no383_d23.g1 CHROMAT_FILE:
MSMg01no383_d23.g1 PHD_FILE: MSMg01no383_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:16 2005
(439 letters)
>mm_chr1_132802012_132802849
Length = 838
Score = 737 bits (381), Expect = 0.0
Identities = 396/401 (98%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 3 attacctctgcagggtccacccatttttaccaggttctttgtagagttatgtgggtctta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 attacctctgcagggtccacccatttttaccaggttctttgtagagttatgtgggtctta 341
Query: 63 cctggtacaaatgagaacttcagcaataaataatcaaatcaaattagggcttgagggagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cctggtacaaatgagaacttcagcaataaataatcaaatcaaattagggcttgagggagg 281
Query: 123 ccccgggaaggtgggctacttggaggacatgtagtgatggaggttccacagcggctccct 182
||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||
Sbjct: 280 ccccgggaaggtgggctac-tggaggacatgtagtgatgggggttcctcagcggctccct 222
Query: 183 agatctgggatacaggaatcaggaacttctccttagtcctggatctgctttctgctgttt 242
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 221 agatctgggatacaggaatcaggaacttctccttagtcctgggtctgctttctgctgttt 162
Query: 243 cagttgagaacaagtatggtcagaaggtgttaagttggaaattctaaaggtaaatgatct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cagttgagaacaagtatggtcagaaggtgttaagttggaaattctaaaggtaaatgatct 102
Query: 303 gtaacttttaaatgacttttattatagtgtgtcgttattgttgctagtcttttatggtgt 362
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gtaacttttaaatgatttttattatagtgtgtcgttattgttgctagtcttttatggtgt 42
Query: 363 ccagttcatacattaaactctagcataggtatgtattgtat 403
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ccagttcatacattaaactctagcataggtatgtattgtat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
