Query= MSMg01no383_g04.b1 MSMg01no383_g04.b1 CHROMAT_FILE:
MSMg01no383_g04.b1 PHD_FILE: MSMg01no383_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:26 2005
(538 letters)
>mm_chr1_82407087_82408023
Length = 937
Score = 973 bits (503), Expect = 0.0
Identities = 527/535 (98%), Gaps = 1/535 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagccagtctagacactgcaggatttatggggggttgtggacagggagttatg 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagccagac-agacactgcaggatttatggggggttgtggacagggagttatg 262
Query: 64 ccctcctggtgcatctgaactgcatgtcagaagtggagatgcaaggcccatacaatattt 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 263 ccctcctggtgcatctgaactgcatgtcagaagtggagatgcaaggcccatataatattt 322
Query: 124 ccaccttgttttcctttctcttccctgaccttacacagtgaacacactcgagggtcaaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaccttgttttcctttctcttccctgaccttacacagtgaacacactcgagggtcaaca 382
Query: 184 caggcccttcaagtccttgctgactgaatttcttcagaaaaaggaaccatgtctctgaga 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caggctcttcaagtccttgctgactgaatttcttcagaaaaaggaaccatgtctctgaga 442
Query: 244 agcaaagtaacctatccacttagccgaggtcacacggggaaaaatcagcagcttttccta 303
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 443 agcaaagtaacctatccacttagccgaggtcacacgggggaaaatcagcagcttttccta 502
Query: 304 tcacttcagcagtggggttttactttgcagtcaagctcagacagatcagaggcaggcaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcacttcagcagtggggttttactttgcagtcaagctcagacagatcagaggcaggcaca 562
Query: 364 ctcgcaggtcagcttctaatccttccagttctccagtaacctatgacctaagcaaggggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctcgcaggtcagcttctaatccttccagttctccagtaacctatgacctaagcaaggggg 622
Query: 424 aagcactcagcccagttagccagcacctgtttgctgtgggttcccagggctccttgtgct 483
|||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 623 aagcacgcagcccagctagccagcacctgtttgctgtaggttcccagggctccttgtgct 682
Query: 484 gtcctactgtgcagaacttagagtcgctaacaagtgaatgtgtctgccttttcca 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtcctactgtgcagaacttagagtcgctaacaagtgaatgtgtctgccttttcca 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_g04.g1 MSMg01no383_g04.g1 CHROMAT_FILE:
MSMg01no383_g04.g1 PHD_FILE: MSMg01no383_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:26 2005
(419 letters)
>mm_chr1_82571742_82572562
Length = 821
Score = 729 bits (377), Expect = 0.0
Identities = 407/421 (96%), Gaps = 8/421 (1%)
Strand = Plus / Minus
Query: 1 tcatttcaaaataaatgaagtgtggttagtaatcacaaacagttagaaggtaacaaggtg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcatttcaaaacaaatgaagtgtggttagtaatcacaaacagttagaaggtaacaaggtg 496
Query: 61 gcattttctggtcacatgtcctagaaaggacttctgtttgtatgctggggaaaagagcct 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 495 gcattttctggtcacatgtcctagaaaggacttcagtttgtatgctggggaaaagagcct 436
Query: 121 ggagacctaagagaggtctccagtgagcagatgcttggaaaagcattgaagtgctgagat 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 435 ggagacctaagagaggtctccagtgagcagatgcttggaaaagcattgacgtgctgagat 376
Query: 181 gggtcccctctcctgcagggcaggtgagttttctgtgagagtgaaccagctttagaacca 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggatcccctctcctgcagggcaggtgagttttctgtgagagtgaaccagctttagaacca 316
Query: 241 caggaagaagagggctcccagc--cacttggtctgcacagattcattgatcgatcataga 298
|||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 315 caggaagaagagggctcccagccacacttggtctgcacagattcattgatcgctcataga 256
Query: 299 aatcacaggaaggaatggggcagcttccgttctgtcagcagattgactcactgcttctct 358
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 255 aatcacaggaaggaatggggcagcttccgttctgtcagcagattggctcactgct----- 201
Query: 359 ctctctctctctctctctctctctctctctctctctctctctctctgacaattgcttttg 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 -tctctctctctctctctctctctctctctctctctctctctctctgacaattgcttttg 142
Query: 419 g 419
|
Sbjct: 141 g 141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 821
Length adjustment: 9
Effective length of query: 410
Effective length of database: 812
Effective search space: 332920
Effective search space used: 332920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
