Query= MSMg01no384_a16.b1 MSMg01no384_a16.b1 CHROMAT_FILE:
MSMg01no384_a16.b1 PHD_FILE: MSMg01no384_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:14 2005
(545 letters)
>mm_chr1_83921889_83922833
Length = 945
Score = 1017 bits (526), Expect = 0.0
Identities = 538/542 (99%), Gaps = 1/542 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaa-ataagtcagcattgctgggaagtcatggcaaccaaagcatctgaatgca 63
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 gaattcaaaatataagtcagcattgctgggaagtcatggcaaccaaagcatttgaatgca 263
Query: 64 cgtgaggtggcagcttgcttacaccttgacacatcctaaaagtcccaagagctagagagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgtgaggtggcagcttgcttacaccttgacacatcctaaaagtcccaagagctagagagg 323
Query: 124 aagcagagctgaccacaccccacaaaatctcctccatgtccttacatctgtcaggttggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagcagagctgaccacaccccacaaaatctcctccatgtccttacatctgtcaggttggc 383
Query: 184 accattcctgaaagttcccacaaccacccaaagcaatacaactaacctaggatcaggtgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 accattcctgaaagttcccacaaccacccaaagcaatacaactaacctaggatcaggtgt 443
Query: 244 tcaagcacaggagctcatgagagtcatttcacattcaaagtttatctccatccaactata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaagcacaggagctcatgagagtcatttcacattcaaagtttatctccatccaactata 503
Query: 304 tgaaatagcattgactacgcaggaaagtgtttcccatgggtatacctattatattacaca 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 504 tgaaatagcattgactacgcaggaaagtgtttcccatgggtatacctattatatcacaca 563
Query: 364 caacatcacagtttcttcttaaagaaatgatacaccttgccttgctgttggcaagcaacg 423
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 564 caacatcacagtttcttcttaaagaaatgatacaccttgccttgctgtcggcaagcaacg 623
Query: 424 ttttgcatgctttcctacacaagcagatacatttcagcttagaagagaaagagggaggaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttttgcatgctttcctacacaagcagatacatttcagcttagaagagaaagagggaggaa 683
Query: 484 aagacattagcatagcataccaaatctagcactacttctgcatagaatttcactcattca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagacattagcatagcataccaaatctagcactacttctgcatagaatttcactcattca 743
Query: 544 tc 545
||
Sbjct: 744 tc 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_a16.g1 MSMg01no384_a16.g1 CHROMAT_FILE:
MSMg01no384_a16.g1 PHD_FILE: MSMg01no384_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:15 2005
(611 letters)
>mm_chr1_84071666_84072676
Length = 1011
Score = 1009 bits (522), Expect = 0.0
Identities = 546/554 (98%)
Strand = Plus / Minus
Query: 1 catggctcagtatgcacagccactctagtgaatgttggatgaattgattgatctgaaatt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 catggctcagtatgcatagccactctagtgaatgttggatgaattgattgatctgaaatt 495
Query: 61 tgtttgaatggatgggttcaaaatatctgtcctacaaagtaagacattctgttggatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 494 tgtttgaatggatgggttcaaaatatctgtcctacaaagtaagacattccgttggatcag 435
Query: 121 attggtttttctgaacaatgggataagattgtgtctacagggtcaccttccctccatggt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 434 attggtttttctgaacaatgggataagattgtgtctacagggtcatcttccctccatggt 375
Query: 181 acctttccaatcctgttacttttccatgctctttgccactccagagtttttgttgtctag 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 374 gcctttccaatcctgttacttttccatgctctttaccactccagagtttttgttgtctaa 315
Query: 241 tctgctcaattagttttgtggaatcacattagaatgggagtaaatattctgtttaaagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tctgctcaattagttttgtggaatcacattagaatgggagtaaatattctgtttaaagtc 255
Query: 301 ctgtatggatagcaactgatatgtatcatttagaaacatttaaaggcacacccgatttct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 254 ctgtatggatagcaactgatatgtatcatttagaaacatttaaaggcacacccggtttct 195
Query: 361 attgctgctattacaagttactgcaacatttgcagcttagagagagatcccatttattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 attgctgctattacaagttactgcaacatttgcagcttagagagagatcccatttattat 135
Query: 421 ctcacagcctcgtgaatcactggttaggatggtctgggccaagtgcattgcttactgtcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctcacagcctcgtgaatcactggttaggatggtctgggccaagtgcattgcttactgtcc 75
Query: 481 tcaaaagctgaaattaatgacagctaaactgtgttcccaactggcaggcatgaagagtct 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 74 tcaaaagctgaaattaatgacagctaagctgtgttcccaactggcaggcatgaagagtct 15
Query: 541 cctccaagaatgtt 554
||||||||||||||
Sbjct: 14 cctccaagaatgtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
