Query= MSMg01no384_i07.b1 MSMg01no384_i07.b1 CHROMAT_FILE:
MSMg01no384_i07.b1 PHD_FILE: MSMg01no384_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:50 2005
(471 letters)
>mm_chr1_150757536_150758406
Length = 871
Score = 820 bits (424), Expect = 0.0
Identities = 457/468 (97%)
Strand = Plus / Plus
Query: 4 ggaattcccaatctactaggaagactatagcacattttcacatgggagagagctgatggg 63
|||| |||||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 204 ggaagtcccaatctagtaggaagactatagcaaactttcacatgggagagagctgatggg 263
Query: 64 ctcactgagataaggtgttgagaagatgtaccaaggggaaattgattttaatggaaagtg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcactgagataaggtgttgagaagatgtaccaaggggaaattgattttaatggaaagta 323
Query: 124 gtgcttggttaataagtatttatatatcttaataatctgcataagatagtaattgaatag 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 gtgcttggttaataagtatttatatatcttaataatctgcataagatagtaattgattag 383
Query: 184 aagattgacccacaatttaaagcagaaggagacaatagttgagtttcacacttaaataaa 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaggttgacccacaatttaaagcagaaggagacaatagttgagtttcacacttaaataaa 443
Query: 244 aaaatggcatggagataatttgtagaaattaattggataattaaatgttacttattataa 303
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 aaaatgccatggagataatttgtagaaattaatttgataattaaatgttacttattataa 503
Query: 304 atacagttttatcattcagcatcataatggttggttaaaatatgattatagatgagtatg 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 504 atacagttttatcattcagcatcataatggttggttaaaatgtgattatagatgattatg 563
Query: 364 acaagtttgattcaaactaaaacacaaggttttccaataaaattagtaaatataatatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acaagtttgattcaaactaaaacacaaggttttccaataaaattagtaaatataatatga 623
Query: 424 ggaatatgaggaatgaaaacccagtgtgatggtttgtatatgactggg 471
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggaatatgaggaatgaaaacccagtgtgatggtttgtatatgactggg 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_i07.g1 MSMg01no384_i07.g1 CHROMAT_FILE:
MSMg01no384_i07.g1 PHD_FILE: MSMg01no384_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:50 2005
(478 letters)
>mm_chr1_150876015_150876892
Length = 878
Score = 895 bits (463), Expect = 0.0
Identities = 477/487 (97%), Gaps = 9/487 (1%)
Strand = Plus / Minus
Query: 1 atatacattattaattcatgtgttaactcacttatgttgcatgggtttaaaatttattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 atatacattattaattcatgtgttaactcacttatgttgcatgggtttaaaatttattat 654
Query: 61 tcattttgtcattataatattaagattttattttcattctatagggtcacaatacaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tcattttgtcattataatattaagattttattttcattctatagggtcacaatacaatca 594
Query: 121 tattaataatttatactgacggtgtttctatttatatcacctagatgaaaaatgtgaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tattaataatttatactgacggtgtttctatttatatcacctagatgaaaaatgtgaaat 534
Query: 181 ttattatattcattgttcatgcatttatatgtatgtagatatttacatatacccttgaaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttattagattcattgttcatgcatttatatgtatgtagatatttacatatacccttgaaa 474
Query: 241 ctttatatgtttagcatatatgttgagttttaaaaagtgaatggtacagttgttttaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ctttatatgtttagcatatatgttgagttttaaaaagtgaatggtacagttgttttaatc 414
Query: 301 taaatattcctgtgctttaataggtgcaaagacctgtgtggtagtacaagggaatctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 taaatattcctgtgctttaataggtgcaaagacctgtgtggtagtacaagggaatctccc 354
Query: 361 ctcattctgcttgctgtatctacctttcatataatatatttggagttaga---------a 411
|||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 353 ctcattctgcttgctgtatctacctttcatataatatatttggagttagaattctaggga 294
Query: 412 ttctagggtcagagagatgtctgtatcctaatttacccatttgatcacactcacagtatc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttctagggtcagagagatgtctgtatcctaatttacccatttgatcacactcacagtatc 234
Query: 472 aggagta 478
|||||||
Sbjct: 233 aggagta 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
