XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTGATT
CAGCTAAGCTGCCTGGCCAGAAAGCCCCAAGGATCATCCATTGCTGGAAT
TTCCATATTGTTTAAAGATGTGTTTTCTGGATATTGAATTCTAGTTCTCA
TGACTATACAACAAATACTTGACTGGCCAAGCCTTGAGAAAAAGATCAGT
ACTGCTCGCTCTGTATAGTGAGTATCCAGCAGGCAATTTAGGCCATAGTA
GGTAAACCATGCTGTCTCAGCTGAAAACTGACTGCTTTTGCTGTTGCCTA
TGCCTGGGAACTTGGGATTCAAACAGTCTTGCAGTCAAAGTCCCTTAAAG
GGAAAACACATTTTATAACATTCTCATTCTAAGTCATATCATTGTTTAAA
TCTTAGGATTCATAAAGAAGCAGGGAATGGGCTTGAGTCCTAAATGTGAA
AATGTTGATACTGTATAAGCAAAAGCACTACAAAAAAAAGTATGCCATCA
TTTATTCCAAAATTGTGGGGAAATTGCGATTTTACTGGTGTTACTGGTGG
TCAGATGCTGAGAATTTTGCTCAATGACTTTCTTTCTTGTGTGTGGTGCT
GGAGGTTGAACCCAGGGCTCTCTGCATGCTAGGCAAGTTCTCTACTGAGA
GATACATTTCTAGCCTCCTTTGCCTCAATTTCAGTACCACATTTGTGTTC
CTGTTCCCATTGGGGCACATACTACAAGAAGAGGATGCCAAGGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAGAGCTTGCAAAATGAGAAACTAGCCCATGTA
AAAAGATAAGCTGGGAAGGTGGCCTAGTCAGTCGGGTGCTTGCAGAGTGA
GTGTGACGATGTGCGTTGGCATCCCCAACCACGATATGCTGGCTAGTCTA
TGTCAACTTGACACACTAGAGTTTTCTGAATGGAAGGAAGCTCAACTGTG
AAGATGCTTCCACAGGATCTAGATGTAAGGCATTTTCTTAATTAGTGATT
GATTGTGGAGGAGTCAACCCAGTGTGAGTGGTACCATCCTGGGCTGGCGG
TTCTGGGTTGTCTAAGAAAGCAAGCTGAGCCAGCCACTATGCGTAAGTCA
GTAAGCACCACCCTTCCATGGCCTCTGCATCAGCTCCTGCCTCAGGGTTC
CTGTCCTGCTTGAGACCCTGTCCTGGCTTCCATTGGTGATAAGCAGCAGT
GTGGAATCATGAACCAAATAAACCCTTTCTTCCCCAACTTGCTTTTTGGT
CTTGGTGATTATTCACAGCAACAGAAACCCTAATTAAGACAAATGACATT
TTTTAAAAATTCTGGTATGGTGATATAGCACTATAATCCCAGCACCAGAG
AAACACAGAGAAGTGGATATCTTGGACTTGCTGGCCAGCCAGCCTAACTG
AATTAGTAGTGAGAGACCCTGTCTCAAAAAAAATG

Query= MSMg01no384_p07.b1 MSMg01no384_p07.b1 CHROMAT_FILE:
MSMg01no384_p07.b1 PHD_FILE: MSMg01no384_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:23 2005
         (571 letters)



>mm_chr1_126752200_126753170
          Length = 971

 Score = 1098 bits (568), Expect = 0.0
 Identities = 568/568 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcactgattcagctaagctgcctggccagaaagccccaaggatcatccattgctg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ggaattcactgattcagctaagctgcctggccagaaagccccaaggatcatccattgctg 765

                                                                       
Query: 64  gaatttccatattgtttaaagatgtgttttctggatattgaattctagttctcatgacta 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gaatttccatattgtttaaagatgtgttttctggatattgaattctagttctcatgacta 705

                                                                       
Query: 124 tacaacaaatacttgactggccaagccttgagaaaaagatcagtactgctcgctctgtat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tacaacaaatacttgactggccaagccttgagaaaaagatcagtactgctcgctctgtat 645

                                                                       
Query: 184 agtgagtatccagcaggcaatttaggccatagtaggtaaaccatgctgtctcagctgaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agtgagtatccagcaggcaatttaggccatagtaggtaaaccatgctgtctcagctgaaa 585

                                                                       
Query: 244 actgactgcttttgctgttgcctatgcctgggaacttgggattcaaacagtcttgcagtc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 actgactgcttttgctgttgcctatgcctgggaacttgggattcaaacagtcttgcagtc 525

                                                                       
Query: 304 aaagtcccttaaagggaaaacacattttataacattctcattctaagtcatatcattgtt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aaagtcccttaaagggaaaacacattttataacattctcattctaagtcatatcattgtt 465

                                                                       
Query: 364 taaatcttaggattcataaagaagcagggaatgggcttgagtcctaaatgtgaaaatgtt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 taaatcttaggattcataaagaagcagggaatgggcttgagtcctaaatgtgaaaatgtt 405

                                                                       
Query: 424 gatactgtataagcaaaagcactacaaaaaaaagtatgccatcatttattccaaaattgt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gatactgtataagcaaaagcactacaaaaaaaagtatgccatcatttattccaaaattgt 345

                                                                       
Query: 484 ggggaaattgcgattttactggtgttactggtggtcagatgctgagaattttgctcaatg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ggggaaattgcgattttactggtgttactggtggtcagatgctgagaattttgctcaatg 285

                                       
Query: 544 actttctttcttgtgtgtggtgctggag 571
           ||||||||||||||||||||||||||||
Sbjct: 284 actttctttcttgtgtgtggtgctggag 257


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)