CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGAGCTGGCCGGAATCA
GCTCCTTTTCCCTACTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTCC
CTTCCTCACTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCCTTCATCCCTTCCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCCT
CTCCCTCTCCCTCGCCCTCTCGCGCTCGCGGGCGCACTGGCGGGGGGTGT
ACGGGAGCGGGGATGGGGGCGAGGGGGTTGGGGGGGGGGAGGCTACCGGG
CGACGGGGTCGGGTTTTTTTTTTGCGGGTGGACAAGGAGGGGCGGGGGCC
TGGGGTTGGGATACGCCGGACAGAGGGGAGAGGGTGACAGGGGAGGGGCG
GGGGGGGGGGCCCACATGGGGGGAGCGGGGGGGCGGGGGGGGGGGCGGCG
TGCGTAGGGGGGGGGGGGAGGGGGGAGCGAGGAGAGAGGGAGGGGTGCCG
GGGAGGGCGGGTTTGTGTTAGGGAGGGAGGAGGGGAGGAGGTGGTCGATG
GGGAGTGGGGTGGGGGTGATGTGTTGGGTAGGGCGGGGCGGGGAATGGGG
AGGATGGTGAAGAATCAGGGGTTAGGGGGGGTGCTACGGTTTCTCGTGGG
GAGTGGCGGCGGAGGGGGGGACTGGGGGAGACGTTAGGAGATTGGGCCGG
GCGCGGACGAGCGTGGAGGGGTGGGTGGGGAGGGAAGGCTGGGTGGAGCC
GTGGACGGTTGGGTGGGCGGTGGGGCCATAATCGGTAGTGGGTCGN

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTATTTCAGGAATTCTCCCCCTGTTCATGGTCTACTTCTATT
TCTTCTGAGTATTGTAGACCTCCCAGTGACCTAATTGGATGGAGCTGACA
GGTCATGTACCAAAAAAGGAAGGAGAACAAGAGAGAGGGCAATAAATTCC
AGTCTGCTTTTAAAGCTTCCACCTAAAACTGATATAGGCTGCATTGTATT
TGTTAAAGCAAGCCATGCTACTGGCTAAATTCAATCAGATGGGAAAAATA
AAAGAACAAGAACACATATCTGATGTCTGCTCCCTGCCAATTATCTGGTT
AGTAAACATTTTGTTCTTTTTTTCTTCCCACACAACATGTTCTCTCACTG
TTCCACTGAAGAAAAGGAAAAAAAAAAACCACTCAAGTGCTGTCCAGTCA
CAACCATGGAAGTTCAGTGTGGTTTCTTGTAAGCCATAGAACGAGGAAAT
ATAAAAGCAAAGCCACACCTCCCTATTCTGCTCACAGAAGACAGAAGAGC
CATGACAGTTCGATGAGAAACACCCACTCGGAAGGGGAAAGACAGGAAGT
CACAGGTGACCACTTATTCAGGGAAACTGCATGAGCCTGTGTGATTAGAG
GGATAGTCACTGGGAGACGTGAAGTATTATACTTGATTAGACTCAAATTC
TTCTGGTAGAAGCCACAAGAAGTTTCCCTGCCTTTGATGTGAGGAGTTN

Query= MSMg01no386_a07.g1 MSMg01no386_a07.g1 CHROMAT_FILE:
MSMg01no386_a07.g1 PHD_FILE: MSMg01no386_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:44 2005
         (572 letters)



>mm_chr1_23203991_23204962
          Length = 972

 Score = 1069 bits (553), Expect = 0.0
 Identities = 568/573 (99%), Gaps = 2/573 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attctccccctgttcatggtctacttctatttcttctgagtattgtagacctcccagtga 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 772 attctccccctgttcatggtctacttctatttcttctcagtattgtagacctcccagtga 713

                                                                       
Query: 61  cctaattggatggagctgacaggtcatgtaccaaaaaaggaaggagaacaagagagaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cctaattggatggagctgacaggtcatgtaccaaaaaaggaaggagaacaagagagaggg 653

                                                                       
Query: 121 caataaattccagtctgcttttaaagcttccacctaaaactgatataggctgcattgtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 caataaattccagtctgcttttaaagcttccacctaaaactgatataggctgcattgtat 593

                                                                       
Query: 181 ttgttaaagcaagccatgctactggctaaattcaatcagatgggaaaaataaaagaacaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 592 ttgttaaagcaagccatgctactggctaaattcaatcagatgggaaaa-taaaagaacaa 534

                                                                       
Query: 241 gaacacatatctgatgtctgctccctgccaattatctggttagtaaacattttgttcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gaacacatatctgatgtctgctccctgccaattatctggttagtaaacattttgttcttt 474

                                                                       
Query: 301 ttttcttcccacacaacatgttctctcactgttccactgaagaaaaggaaaaaaaaaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 473 ttttcttcccacacaacatgttctctcactgttccactgaagaaaaggaaaaaaaaaaaa 414

                                                                       
Query: 361 -cactcaagtgctgtccagtcacaaccatggaagttcagtgtggtttcttgtaagccata 419
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acactcaagtgctgtccagtcacaaccatggaagttcagtgtggtttcttgtaagccata 354

                                                                       
Query: 420 gaacgaggaaatataaaagcaaagccacacctccctattctgctcacagaagacagaaga 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaacgaggaaatataaaagcaaagccacacctccctattctgctcacagaagacagaaga 294

                                                                       
Query: 480 gccatgacagttcgatgagaaacacccactcggaaggggaaagacaggaagtcacaggtg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gccatgacagttcgatgagaaacacccactcggaaggggaaagacaggaagtcacaggtg 234

                                            
Query: 540 accacttattcagggaaactgcatgagcctgtg 572
           |||||||||||||| ||||||||||||||||||
Sbjct: 233 accacttattcaggaaaactgcatgagcctgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)