Query= MSMg01no386_a10.b1 MSMg01no386_a10.b1 CHROMAT_FILE:
MSMg01no386_a10.b1 PHD_FILE: MSMg01no386_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:45 2005
(665 letters)
>mm_chr1_38217479_38218543
Length = 1065
Score = 1255 bits (649), Expect = 0.0
Identities = 658/661 (99%)
Strand = Plus / Plus
Query: 5 gaattcagtgttcttgcccgaggtcacaaatattacttaggggcagtgactctgggacat 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgctcttgcccgaggtcacaaatattacttaggggcagtgactctgggacat 264
Query: 65 cggacacttaggttggaattctgaatacctcccaaactttgtggggagggtgggataaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cggacacttaggttggaattctgaatacctcccaaactttgtggggagggtgggataaag 324
Query: 125 aacactgaaacacctcatacgttttctgtgtgatgtatgtcggcctttgccgaatccagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacactgaaacacctcatacgttttctgtgtgatgtatgtcggcctttgccgaatccagg 384
Query: 185 gtttgagactgccatttttaccccccaaacaaagcagaataaaacaaaacaactcattca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtttgagactgccatttttaccccccaaacaaagcagaataaaacaaaacaactcattca 444
Query: 245 atgtgatttacaaattgcagccacctaataatagtaccttgcgtttctggagatcttttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtgatttacaaattgcagccacctaataatagtaccttgcgtttctggagatcttttc 504
Query: 305 atcgcaacactctttccagacaataactaatgaattttcccaactccctctaggaacaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcgcaacactctttccagacaataactaatgaattttcccaactccctctaggaacaga 564
Query: 365 gacacgtgcatttccatttaatttacatgaaatgaagaaaaaagacatcatgaagccgca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gacacgtgcatttccatttaatttacatgaaatgaagaaaaaagacatcatgaagccgca 624
Query: 425 ttccattaaatcataattacgacctcgggcctgaggtagacatactgaactaactctccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttccattaaatcataattacgacctcgggcctgaggtagacatactgaactaactctccc 684
Query: 485 agggaggctgtgatgcttaagcattggggagtttccactttccgttctccctttacctgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agggaggctgtgatgcttaagcattggggagtttccactttccgttctccctttacctgc 744
Query: 545 atacggagaatgaataagaaatacacacattgcatttaccatctcaggatctgggcattc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 745 atacggagaatgaataagaaatacacacattgcatttaccatctcaggatctgggcactc 804
Query: 605 tgtttttattgtctttgcataaatgacttgctagggacaagtgctggggcaggggtcaga 664
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tgtttttattgcctttgcataaatgacttgctagggacaagtgctggggcaggggtcaga 864
Query: 665 t 665
|
Sbjct: 865 t 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_a10.g1 MSMg01no386_a10.g1 CHROMAT_FILE:
MSMg01no386_a10.g1 PHD_FILE: MSMg01no386_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:45 2005
(537 letters)
>mm_chr1_38383342_38384278
Length = 937
Score = 746 bits (386), Expect = 0.0
Identities = 441/464 (95%), Gaps = 9/464 (1%)
Strand = Plus / Minus
Query: 24 cacatggaccgctaacccaaaggtccatgacgaggtaaatggaaagaagcccgcatgtgc 83
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cacatggacctctaacccaaaggtccatgacgaggtaaatggaaagaagcccgcatgtgc 399
Query: 84 acttcactgccagacatggaggagggaaaggtttgcataccctttaatacattttgttta 143
|||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 398 acttcactgccagacacaaaagagggaaaggtttgcgtaccctttaatacattttgttta 339
Query: 144 taagaaagaaacacccaagctgatctcacaagcatagccatggaaatcagcaaaccgtgg 203
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 338 taagaaagaaacgcccaagctgatctcacaagcgtagccatggaaatcagcaaaccgtgg 279
Query: 204 acatatagctgcagttagctgagggaacttgttaaatcaactgaaaaatctaggtgggta 263
|||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||
Sbjct: 278 acatatagctgcagttagctgaaggaacttattaaatcaactgaaaactctaggtgggta 219
Query: 264 gagagatggcctcacagttaaggctgggtaccactcttgcagaagaccagagagccattc 323
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gagagagggcctcacagttaaggctgggtaccactcttgcagaagaccagagagccattc 159
Query: 324 cagctcacaaccccatggaatcccagatccaggagatgcagcac---cctggctcctttg 380
|||||||||||||||||||||| |||||||||||||||| ||||||||| | |
Sbjct: 158 cagctcacaaccccatggaatc------ccaggagatgcagcaccctcctggctccctgg 105
Query: 381 tgcggctgtccacagatagttaagtgaaatattttatttcaaaatcccatgtaaccaaag 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tgcggctgtccacagatagttaagtgaaatattttatttcaaaatcccatgtaaccaaag 45
Query: 441 gcaaaactacatgaaattaatgttatcatagtatatgtttataa 484
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 gcaaaactacatgaaattaatgttatcatagtatatgtttataa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
