Query= MSMg01no386_l08.b1 MSMg01no386_l08.b1 CHROMAT_FILE:
MSMg01no386_l08.b1 PHD_FILE: MSMg01no386_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:34 2005
(244 letters)
>mm_chr1_188838477_188839120
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Minus
Query: 1 aagcggttgcctccacttgacaggaggaagctaaacctccaagaggttgcacctagtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 444 aagcggttgcctccacttgacaggaggaagctaaacctccaagaggttgcacccagtgag 385
Query: 61 ttctcatggcatctgcaagcattgtgggcagtagctctgcccctccatctgctgcagcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctcatggcatctgcaagcattgtgggcagtagctctgcccctccatctgctgcagcga 325
Query: 121 gacactgtaagtgcttaacggttgattattgctgacaacatttcctttaaattatccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gacactgtaagtgcttaacggttgattattgctgacaacatttcctttaaattatccttt 265
Query: 181 tctgaaatatggctgtcaaaagaaaacccccttaaacttgcaatacctaaaggcttggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctgaaatatggctgtcaaaagaaaacccccttaaacttgcaatacctaaaggcttggtt 205
Query: 241 tgtg 244
||||
Sbjct: 204 tgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no386_l08.g1 MSMg01no386_l08.g1 CHROMAT_FILE:
MSMg01no386_l08.g1 PHD_FILE: MSMg01no386_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:34 2005
(162 letters)
>mm_chr1_188684678_188685240
Length = 563
Score = 261 bits (135), Expect = 1e-74
Identities = 156/163 (95%), Gaps = 1/163 (0%)
Strand = Plus / Plus
Query: 1 cattttgatttttctagttttcctttaagcggcccctgtctccatgtgctgtgaccccc- 59
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 201 cattttgatttttctagttttcctttaagtggcaagtgtctccatgtgctgtgacccccc 260
Query: 60 gcaatcactgcagctgcaagccctccatgcaccgctaaagctgtgggtttgtttttggac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaatcactgcagctgcaagccctccatgcaccgctaaagctgtgggtttgtttttggac 320
Query: 120 ttcagttaagatgatgattggcacataattaccaatgaccaga 162
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ttcagttaaggcgatgattggcacataattaccaatgaccaga 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 563
Length adjustment: 8
Effective length of query: 154
Effective length of database: 555
Effective search space: 85470
Effective search space used: 85470
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
