NNNTTCTTCTXXXXXXXXXXXXXXXXXXXXXXXCCTTNATCCCCCCCTCC
CCGCGATTCCCGGAGATCCCGCGCTACCGAGAAACCCTGACTCCAAAAAA
AAAATGAGAGACTCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAC
ACTCTGCTGTGTACCCCCTCTCTCTCCTCTGATCTCCCTGATGTGTGTTG
TGCCCCCTTTTTTCTTCTGCTCCTCTCTTTGTCCCCTCTCCTCTACGACC
CTCTGCTCTCTCGCCCTGAGACCTTTGCTCATTTCCCCCCTCCTTCCCTG
AGTTGCTTTTGTTATCTTTTTTCCCCCCGCCCTCGCCAGTGTCTCTCATC
CTCGCCTCTCTTTGCAACCCCCCCTCCCCTCTTTTCCCCCTTCTGCTTTC
CCCCCCCCTTTTCCTCCCCCTCCCCTCCTTCCTCNTCTCCCCCCTCCTTT
CCCCCCTCCCCCTGCTCTTTTTTCTCCCTCCCTCCCCCCCCTCCCTTTTC
TCTCCCGTTTTTTTCCTCCCCTCTTCCCCCCCCCCCCTCTCCTTCCCCCC
CTCTCCTCCCCCTCCTCTCTCTCTTCTCCCTTCTCTTCCCCTTCCTTTCT
TGCCCTTCCCCCTCCTTCTCTTTCCCTTCTTCCTTCCTTCCCTGCTCCCC
CCCTTCCCCCCTCCCTCTTTCTTTCCCCTCTCCCCCCCTCTTCCCTTCTC
CTTCCCCCCCCCTCCCCCTTT

NNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTTGGACTGGGTGCTGAC
ATCTCCCCCCACCCACACCTTTTTTAGTTTTTAATATCAGGATATCCACC
GTTTATTTTGATCTGGGATGTTGGAGCTAAATCTAATTGTCATGTGATGT
ATGAGTTTCTGATAAGCAAGCAAATTGTATTGTAACAGTGAAAGCCTTGT
GTTTAATACTCTGCCACCTAGAACAGACATCCAAACTATGTCCAGTACTG
TTGGTTAAATTATTATATTGATCAGGAAAGTCTAAAGAATAGTTGGAAAA
GAGACTCTTATGATCAGTAGTTCTGGTATCTGGTAAAACATAAGCCCGTA
TTTGCCTTCTAATAGAAATACAAATGTTATGATGTCGTATGCAAATAGGA
AGTGACTTAAATCCCAAGGAAAATTAAACAGAGTCGCTTAGTCAAATGAA
TGAGCATTGTCTATTACAAGGTCCAGTTAGAAACAGAGTCACTAATAAAG
TAACTTCTCCCTGCTGCATAGGGTCTTCACTTGGGCCCAGGCAGACAGAT
TTGACTTCTGATGCTATTTCCTTATGTCCTTTCAATAGAACTTTGGTGTC
TTTTTGGTGAACTCCTTTGTCTCCTCCTCTGTCCTAAATCCCGAATTGGT
TTGGCCCCAAGGAATGAAATTGCCTCCTTATGTGTTCTCGGGATCATTTG
TATGTTCTAATTTCCCC

Query= MSMg01no387_d11.g1 MSMg01no387_d11.g1 CHROMAT_FILE:
MSMg01no387_d11.g1 PHD_FILE: MSMg01no387_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:12 2005
         (472 letters)



>mm_chr1_128086360_128087228
          Length = 869

 Score =  847 bits (438), Expect = 0.0
 Identities = 463/472 (98%), Gaps = 3/472 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcttggactgggtgctgacatctccccccacccacaccttttttagtttttaatatca 60
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 669 tctcttggactgggtgctgacatct-cccccacccacaccgtttttagtttttaacatca 611

                                                                       
Query: 61  ggatatccaccgtttattttgatctgggatgttggagctaaatctaattgtcatgtgatg 120
           ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggatatccagcgttcattttgatctgggatgttggagctaaatctaattgtcatgtgatg 551

                                                                       
Query: 121 tatgagtttctgataagcaagcaaattgtattgtaacagtgaaagccttgtgtttaatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tatgagtttctgataagcaagcaaattgtattgtaacagtgaaagccttgtgtttaatac 491

                                                                       
Query: 181 tctgccacctagaacagacatccaaactatgtccagtactgttggttaaattattatatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tctgccacctagaacagacatccaaactatgtccagtactgttggttaaattattatatt 431

                                                                       
Query: 241 gatcaggaaagtctaaagaatagttggaaaagagactcttatgatcagtagttctggtat 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gatcagaaaagtctaaagaatagttggaaaagagactcttatgatcagtagttctggtat 371

                                                                       
Query: 301 ctggtaaaacataagcccgtatttgccttctaatagaaatacaaatgttatgatgtcgta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctggtaaaacataagcccgtatttgccttctaatagaaatacaaatgttatgatgtcgta 311

                                                                       
Query: 361 tgcaaataggaagtgacttaaatcccaaggaaaattaaacagagtcgcttagtcaaatga 420
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 310 tgcaaataggaagtgacttaaatcccaaggaaaattaaacagggtcgcttagtcaaatga 251

                                                               
Query: 421 atgagcattgtctattacaaggtccagttagaaacagagtcactaataaagt 472
           |||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 250 atgagcattgtctattacaaggtccagttagaaac--agtcactaataaagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 869
Length adjustment: 10
Effective length of query: 462
Effective length of database: 859
Effective search space:   396858
Effective search space used:   396858
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)