Query= MSMg01no388_c21.b1 MSMg01no388_c21.b1 CHROMAT_FILE:
MSMg01no388_c21.b1 PHD_FILE: MSMg01no388_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:27 2005
(461 letters)
>mm_chr1_162497630_162498488
Length = 859
Score = 862 bits (446), Expect = 0.0
Identities = 456/460 (99%), Gaps = 2/460 (0%)
Strand = Plus / Plus
Query: 2 gaattctctgacttcatttgtttaaacacaaactaatgaggggtggcagaggagccggct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctctgacttcatttgtttaaacacaaactaatgaggggtggcagaggagccggct 261
Query: 62 tgggtaagaacacttctggctcatgcaggagaccaagagtgtattcctggaacccacatg 121
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgggtaagaacacttatggctcatgcaggagaccaagagtgtattcctggaacccacatg 321
Query: 122 gtggcatcagacccagtttgagggtattaagacaacctcttctgagttgtgcacatacat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtggcatcagacccagtttgagggtattaagacaacctcttctgagttgtgcacatacat 381
Query: 182 acatgcccgcaaatactgatgcacataaaataaaagaataaatcttttttataaacagaa 241
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acatgccggcaaatactgatgcacataaaataaaagaataaatcttttttataaacagaa 441
Query: 242 atgaccatattcgatcttttacttacattttaatactgttatagacaaaacttccaaatc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atgaccatattcgatcttttacttacattttaatactgttatagacaaaacttccaaatc 501
Query: 302 atggactgtaaggaggctcttttcttaacgttcctccaccagtctacctgagttgccagg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atggactgtaaggaggctcttttcttaacgttcctccaccagtctacctgagttgccagg 561
Query: 362 actacagtcatgcatcccccgacacccagctttctaatcttttctctttttaagaaaatg 421
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 actacagtcatgcatccc--gacacccagctttctaatcttttctctttttaagaaaatg 619
Query: 422 catctgccttgtctggcctcaatgggaagggaagtgccta 461
||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catctgccttgtctggcctcaatgggaagggaagtgccta 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 859
Length adjustment: 10
Effective length of query: 451
Effective length of database: 849
Effective search space: 382899
Effective search space used: 382899
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_c21.g1 MSMg01no388_c21.g1 CHROMAT_FILE:
MSMg01no388_c21.g1 PHD_FILE: MSMg01no388_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:27 2005
(466 letters)
>mm_chr1_162656392_162657257
Length = 866
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%)
Strand = Plus / Minus
Query: 1 gaatatatgaattaaacaaaatcagaaaaatgaaatgatgtattccatttggtgaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gaatatatgaattaaacaaaatcagaaaaatgaaatgatgtattccatttggtgaaacaa 607
Query: 61 attccatctttttgtaagtgctgaggtcaattgcagcgtcttgtttatgatcaaggtacc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 606 attccatctttttgtaagtgctgaggtcaattgcagcatcttgtttatgatcaaggtacc 547
Query: 121 actgagctgcaattgcagatcaacagtgctagcagtttcttctattggaaggaatatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 actgagctgcaattgcagatcaacagtgctagcagtttcttctattggaaggaatatttt 487
Query: 181 tgttttaagcaaatttaaaaaacagtgtttcctagatgaatatgttcattgaagttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgttttaagcaaatttaaaaaacagtgtttcctagatgaatatgttcattgaagttaaga 427
Query: 241 aatttgttatactattcagtaagatcttacttgcatttcccagagtgagtattgacaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aatttgttatactattcagtaagatcttacttgcatttcccagagtgagtattgacaata 367
Query: 301 ggacctttgaagcctcctttttcaccatgttcttcaaccaacgcgttgatgggctgagag 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggacctttgatgcctcctttttcaccatgttcttcaaccaacgcgttgatgggctgagag 307
Query: 361 gtttgacgtctttggtgtttctagcacatagtttgagatgttaattctgacacttatttg 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtttgacgtcttcggtgtttctagcacatagtttgagatgttaattctgacacttatttg 247
Query: 421 gatctgggggcaagaataatttttagaaagtgtagtatttattgtt 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gatctgggggcaagaataatttttagaaagtgtagtatttattgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
