Query= MSMg01no388_e19.b1 MSMg01no388_e19.b1 CHROMAT_FILE:
MSMg01no388_e19.b1 PHD_FILE: MSMg01no388_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:36 2005
(431 letters)
>mm_chr1_134108935_134109765
Length = 831
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%), Gaps = 2/432 (0%)
Strand = Plus / Minus
Query: 1 acattggggagcaagtcattttttctgctgctttctgacccaagggctaggcccacccca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 631 acattggggagcaagtcattttttctgctgctttctgacccaagggttaggcccacccca 572
Query: 61 gtgctgaccaacccacatagaattcctcagtttgtgtcctcctcggaagggcttataggg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 571 gtgctgaccaacccacatagaattcctcagtttgtgtcctcctcggaatggcttataggg 512
Query: 121 ccaatgaatgtgggtcatgtcaacttcaggcttccacatagaggctctgatggctctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccaatgaatgtgggtcatgtcaacttcaggcttccacatagaggctctgatggctctctt 452
Query: 181 ggcagtggaaattgacccaccttgtaactaggagggtataggtgcagaaaacttacaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ggcagtggaaattgacccaccttgtaactaggagggtataggtgcagaaaacttacaggt 392
Query: 241 tgggggctgtcagggtcccgggacacatggacacggacagaggaaatgaaaactggacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgggggctgtcagggtcccgggacacatggacacggacagaggaaatgaaaactggacag 332
Query: 301 tttcctcttgtccttacagacatttgattgattcctgtagggcaggaacggccgacccat 360
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 331 tttcctcttgtccttacagac-tttgattgattcctgtaggacaggaacggccgacccat 273
Query: 361 catcttggagacacagctcccagagctaagagtaaagt-gccaaaaggagagctgctaca 419
||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 272 catcttgaagacacagctcccagagctaagagtaaagtggccaaaagaagagctgctaca 213
Query: 420 tgcaagcacaca 431
||||||||||||
Sbjct: 212 tgcaagcacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_e19.g1 MSMg01no388_e19.g1 CHROMAT_FILE:
MSMg01no388_e19.g1 PHD_FILE: MSMg01no388_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:36 2005
(384 letters)
>mm_chr1_133929074_133929857
Length = 784
Score = 636 bits (329), Expect = 0.0
Identities = 365/377 (96%)
Strand = Plus / Plus
Query: 1 tggggatcctgaaacgcagtcttcaactgcttgatatgtcttcatgaaacacttaaagcc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tggggatcctgaaacgcagtcttcaactgcttgatatgtcttcatggaacacttaaagcc 260
Query: 61 agctcagaagaaggggacgacggtgaaatgattgtcagcgtggaaggaatggagagagga 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 agctcagaagaaggggacgacggtgaaatgattgtcggcgtggaaggaatggagagagga 320
Query: 121 cagatgggctggaaacactgtgaaatctttaaagttgtactacatttatttatgttgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagatgggctggaaacactgtgaaatctttaaagttgtactacatttatttatgttgtgt 380
Query: 181 ctgggtgtatgtgcaggtgtgccacagtgcatgcatggcaattgggacagctttgtttga 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ctgggtgtatgtgcaggtttgccacagtgcatgcatggcaattgggacagctttggggga 440
Query: 241 tctttgtttggcttatgtcacgtgtgtcctggggatcagactctgtcaaaggcttggtgg 300
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tcagtgtttggcttatgtcacgtgtgtcctggggatcagactcagtcaaaggcttggtgg 500
Query: 301 catctcctttgttctgtgggccatcttgctggccctgaaatgtgtgtgtctcagcttgtg 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 501 catctcctttgttctgtgggccatcttactggccctgaaatgtgtgtgtctcagcgtgtg 560
Query: 361 tgtgtgtgtgtgtgtgt 377
| |||||||||||||||
Sbjct: 561 tatgtgtgtgtgtgtgt 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
