MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-390P04
Chromosome	1 (Build37)
Map Location	82,986,036 - 82,986,599
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Irs1, Rhbdd1, Col4a4, Col4a3, 5230400G24Rik, Tm4sf20, LOC100039491, Hrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524
Downstream gene	EG665236, LOC665246, Slc19a3, LOC665196, LOC621495, A030005K14Rik, 5530401N06Rik, EG665272, Ccl20, LOC100039575, 4930563E19Rik, EG621614, 4930544G21Rik, EG622958
Link	Open Mouse BAC browser

Click to get alignment info.

name	Irs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16367 MGI:99454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhbdd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76867 MGI:1924117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col4a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12829 MGI:104687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col4a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12828 MGI:104688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5230400G24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75734 MGI:1922984
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tm4sf20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66261 MGI:1913511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039491 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Hrb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15463 MGI:1333754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A030005L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77922 MGI:1925172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	A030014E15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77917 MGI:1925167
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	EG621362 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621362 MGI:3644079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	A030003K21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77913 MGI:1925163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC665225 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	LOC100039524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG665236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665236 MGI:3644885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC665246 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins pseudo : _no_value

name	Slc19a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80721 MGI:1931307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC621495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	A030005K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77921 MGI:1925171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins

name	5530401N06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71386 MGI:1918636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins

name	EG665272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665272 MGI:3644304
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ccl20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20297 MGI:1329031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039575 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039575
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	4930563E19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71227 MGI:1923089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG621614 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621614 MGI:3643858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	4930544G21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77629 MGI:1924879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622958 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622958 MGI:3647016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 5 Proteins

name	Irs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130087 GeneID:16367 MGI:99454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin receptor substrate 1 transcript_id : NM_010570.3

name	Rhbdd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541966 GeneID:76867 MGI:1924117
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rhomboid domain containing 1 transcript_id : NM_029777.2

name	Col4a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328044 GeneID:12829 MGI:104687
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IV, alpha 4 transcript_id : NM_007735.1

name	Col4a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680967 GeneID:12828 MGI:104688
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IV, alpha 3 transcript_id : NM_007734.1

name	5230400G24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254162 GeneID:75734 MGI:1922984
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5230400G24 gene transcript_id : NM_029409.2

name	Tm4sf20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364501 GeneID:66261 MGI:1913511
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane 4 L six family member 20 transcript_id : NM_025453.2

name	LOC100039491 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234128 GeneID:100039491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to keratin associated protein 5-2 transcript_id : XM_001472987.1

name	Hrb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387721 GeneID:15463 MGI:1333754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HIV-1 Rev binding protein transcript_id : NM_010472.2

name	A030005L19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363731 GeneID:77922 MGI:1925172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA A030005L19 gene transcript_id : XM_896385.2

name	A030014E15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363732 GeneID:77917 MGI:1925167
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : RIKEN cDNA A030014E15 gene transcript_id : XM_896395.2

name	EG621362 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363733 GeneID:621362 MGI:3644079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG621362 transcript_id : XM_896406.2

name	A030003K21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363735 GeneID:77913 MGI:1925163
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : RIKEN cDNA A030003K21 gene transcript_id : XM_896429.2

name	LOC665225 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94363737 GeneID:665225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to keratin associated protein 5-2 transcript_id : XM_975463.1

name	LOC100039524 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234130 GeneID:100039524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to keratin associated protein 5-2 transcript_id : XM_001473054.1

name	EG665236 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234132 GeneID:665236 MGI:3644885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG665236 transcript_id : XM_975542.2

name	Slc19a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385307 GeneID:80721 MGI:1931307
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 19 (sodium/hydrogen exchanger), member 3 transcript_id : NM_030556.1

name	LOC621495 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94363742 GeneID:621495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : similar to keratin associated protein 5-2 transcript_id : XM_896478.2

name	5530401N06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363745 GeneID:71386 MGI:1918636
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins product : RIKEN cDNA 5530401N06 gene transcript_id : XM_896507.2

name	Ccl20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8394247 GeneID:20297 MGI:1329031
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 20 transcript_id : NM_016960.1

name	4930563E19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374152 GeneID:71227 MGI:1923089
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930563E19 gene transcript_id : NM_027725.2

name	4930544G21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66773172 GeneID:77629 MGI:1924879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930544G21 gene transcript_id : NM_172430.2

name	EG622958 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363739 GeneID:622958 MGI:3647016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 51 ESTs, 5 Proteins product : predicted gene, EG622958 transcript_id : XM_891787.2

name	Irs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29825829 CCDS:CCDS15096.1 GeneID:16367 MGI:99454
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005792 - microsome [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005158 - insulin receptor binding [Evidence ISS] [Evidence IEA]; GO:0005159 - insulin-like growth factor receptor binding [Evidence ISS]; GO:0043548 - phosphoinositide 3-kinase binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0019901 - protein kinase binding [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0042169 - SH2 domain binding [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence ISS] [Evidence IEA]; GO:0005069 - transmembrane receptor protein tyrosine kinase docking protein activity [Evidence ISS] GO_process : GO:0008286 - insulin receptor signaling pathway [Evidence ISS]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : insulin receptor substrate 1 protein_id : NP_034700.2

name	Rhbdd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541967 CCDS:CCDS15097.1 GeneID:76867 MGI:1924117
definition	codon_start : 1 exception : mismatches in translation product : rhomboid domain containing 1 protein_id : NP_084053.2

name	Col4a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328045 GeneID:12829 MGI:104687
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0005581 - collagen [Evidence IEA]; GO:0005587 - collagen type IV [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : procollagen, type IV, alpha 4 protein_id : NP_031761.1

name	Col4a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680968 GeneID:12828 MGI:104688
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0005581 - collagen [Evidence IEA]; GO:0005587 - collagen type IV [Evidence IDA] [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005178 - integrin binding [Evidence ISS]; GO:0008191 - metalloendopeptidase inhibitor activity [Evidence ISS] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : collagen type IV alpha3 chain product : procollagen, type IV, alpha 3 protein_id : NP_031760.1

name	5230400G24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254163 CCDS:CCDS15098.1 GeneID:75734 MGI:1922984
definition	codon_start : 1 product : hypothetical protein LOC75734 protein_id : NP_083685.2

name	Tm4sf20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384858 CCDS:CCDS15099.1 GeneID:66261 MGI:1913511
definition	codon_start : 1 product : transmembrane 4 L six family member 20 protein_id : NP_079729.1

name	LOC100039491 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234129 GeneID:100039491
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473037.1

name	Hrb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563260 CCDS:CCDS15100.1 GeneID:15463 MGI:1333754
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001675 - acrosome formation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : HIV-1 Rev binding protein protein_id : NP_034602.1

name	A030005L19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880741 GeneID:77922 MGI:1925172
definition	codon_start : 1 product : hypothetical protein LOC77922 protein_id : XP_901478.1

name	A030014E15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880743 GeneID:77917 MGI:1925167
definition	codon_start : 1 product : hypothetical protein LOC77917 protein_id : XP_901488.1

name	EG621362 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363734 GeneID:621362 MGI:3644079
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901499.2

name	A030003K21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363736 GeneID:77913 MGI:1925163
definition	codon_start : 1 product : hypothetical protein LOC77913 protein_id : XP_901522.2

name	LOC665225 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94363738 GeneID:665225
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980557.1

name	LOC100039524 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234131 GeneID:100039524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473104.1

name	EG665236 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234133 GeneID:665236 MGI:3644885
definition	codon_start : 1 product : hypothetical protein protein_id : XP_980636.2

name	Slc19a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385308 CCDS:CCDS15101.1 GeneID:80721 MGI:1931307
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005542 - folic acid binding [Evidence IEA]; GO:0008517 - folic acid transporter activity [Evidence ISS]; GO:0008518 - reduced folate carrier activity [Evidence IEA]; GO:0015234 - thiamin transporter activity [Evidence ISS] GO_process : GO:0015884 - folic acid transport [Evidence ISS]; GO:0015888 - thiamin transport [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 19 (sodium/hydrogen exchanger), member 3 protein_id : NP_085033.1

name	LOC621495 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82880756 GeneID:621495
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901571.1

name	5530401N06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880761 GeneID:71386 MGI:1918636
definition	codon_start : 1 product : hypothetical protein LOC71386 protein_id : XP_901600.1

name	Ccl20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394248 GeneID:20297 MGI:1329031
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine subfamily A20 product : chemokine (C-C motif) ligand 20 protein_id : NP_058656.1

name	4930563E19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313046 CCDS:CCDS15103.1 GeneID:71227 MGI:1923089
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC71227 protein_id : NP_082001.1

name	4930544G21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66773173 GeneID:77629 MGI:1924879
definition	codon_start : 1 exception : mismatches in translation product : sphingosine kinase type 1-interacting protein protein_id : NP_766018.2

name	EG622958 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880791 GeneID:622958 MGI:3647016
definition	codon_start : 1 product : hypothetical protein protein_id : XP_896880.1

name	LOC665196 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665196
definition	number : 1 pseudo : _no_value

name	EG665272 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665272
definition	number : 1 pseudo : _no_value

name	LOC100039575 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039575
definition	number : 1 pseudo : _no_value

name	LOC100039575 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039575
definition	number : 2 pseudo : _no_value

name	EG621614 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621614
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:143605
definition	standard_name : Irs1

name	(CDS detail)
type	STS
link
xref	UniSTS:123459
definition	standard_name : 20.MMHAP18FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:464712
definition	standard_name : Irs1

name	(CDS detail)
type	STS
link
xref	UniSTS:128522
definition	standard_name : D1Mit183

name	(CDS detail)
type	STS
link
xref	UniSTS:207180
definition	standard_name : BB223204

name	(CDS detail)
type	STS
link
xref	UniSTS:234164
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128808
definition	standard_name : D1Mit44

name	(CDS detail)
type	STS
link
xref	UniSTS:178420
definition	standard_name : AI314140

name	(CDS detail)
type	STS
link
xref	UniSTS:128743
definition	standard_name : D1Mit382

name	(CDS detail)
type	STS
link
xref	UniSTS:128599
definition	standard_name : D1Mit254

name	(CDS detail)
type	STS
link
xref	UniSTS:479152
definition	standard_name : Col4a3

name	(CDS detail)
type	STS
link
xref	UniSTS:158818
definition	standard_name : AI314724

name	(CDS detail)
type	STS
link
xref	UniSTS:128744
definition	standard_name : D1Mit383

name	(CDS detail)
type	STS
link
xref	UniSTS:162186
definition	standard_name : RH125364

name	(CDS detail)
type	STS
link
xref	UniSTS:167279
definition	standard_name : AU022786

name	(CDS detail)
type	STS
link
xref	UniSTS:266403
definition	standard_name : HRB

name	(CDS detail)
type	STS
link
xref	UniSTS:178423
definition	standard_name : C85612

name	(CDS detail)
type	STS
link
xref	UniSTS:158819
definition	standard_name : AU045498

name	(CDS detail)
type	STS
link
xref	UniSTS:128937
definition	standard_name : D1Mit8

name	(CDS detail)
type	STS
link
xref	UniSTS:224154
definition	standard_name : Slc19a3

name	(CDS detail)
type	STS
link
xref	UniSTS:178424
definition	standard_name : AI788884

name	(CDS detail)
type	STS
link
xref	UniSTS:185444
definition	standard_name : AW124805

name	(CDS detail)
type	STS
link
xref	UniSTS:158757
definition	standard_name : Scya20

name	(CDS detail)
type	STS
link
xref	UniSTS:178425
definition	standard_name : AB015136

name	(CDS detail)
type	STS
link
xref	UniSTS:165084
definition	standard_name : AI852220

name	(CDS detail)
type	STS
link
xref	UniSTS:234165
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128745
definition	standard_name : D1Mit384

name	(CDS detail)
type	STS
link
xref	UniSTS:128600
definition	standard_name : D1Mit255

name	LOC665246 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234135 GeneID:665246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins product : similar to potassium channel tetramerisation domain containing 3 pseudo : _no_value transcript_id : XR_031030.1

name	A030005K14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94363744 GeneID:77921 MGI:1925171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins product : RIKEN cDNA A030005K14 gene transcript_id : XR_002331.1

clone name	MSMg01-379O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-187B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-333H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-407E19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277P11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-047J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-390P04.T7 (MSMg01no390_p04.b1)	MSMg01-390P04.TJ (MSMg01no390_p04.g1)
ACC	AG492838	AG492839
length	802	756
length of high quality (start - end)	77 (98 - 174)	560 (81 - 640)
definition	CHROMAT_FILE: MSMg01no390_p04.b1 PHD_FILE: MSMg01no390_p04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:35:00 2005	CHROMAT_FILE: MSMg01no390_p04.g1 PHD_FILE: MSMg01no390_p04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:35:01 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNAACTCCATAATCTGCGGGCGCTCAANGAATCCCCACATACTGACGGAC CGCGCGGAANTNTCACCAATGCCACCCACCGCAGAGAGCCANAGNCAGAC ATTAGAAGGAGCACCCTTAGTCTTCTGGAAGACTTAGAGGAGGGATTGAG GGACCTGGAAGGGATATGGACTCCACGGGAGGAGCAACAGAGTCAACTAA GCTGGATCCTTGGAGGCTCCCAAAGACTGAGCCACCAACCAAAGAGACAT AGCTCCACACACTTGTATGTTGCAAATGTGAAGCTTGGTCTTCATGCAGA CCCCCTAACAACTAGAATGGAAGCTGTCTCTGATCTCTAATGCCTGCCTG TGGATCCTGTTCCCCTAACTGGTCTGCCTTGTCTGGCCTCGGCGGCGGAG GATGTGCCTAGTCCTGCAGTGACTTACTGTGCCCGGGTGGGTTGGTACTC CCAGGGACACTCCCCCTTCTCAGAGGACCACAGAACAGCGCGCTGGCCGC ACCGCCCTGCCCCCCGTGGTCCCCCCCTCCCCCCCCCCCTCGCCCCCACG CCCCCTCCCTTCTCCCTCCGCTCCCACCCCCCCCCCCCCCCCCCCCCCCC CCCTCACCCTCCCCCACCCCCCCACCCCCCCCCCCCCCCCCTTCCCCCCA CTTCTCCCCCCCCCCGCCCCCCCCCCTCCCCACCCCGCCCCTCCCCTCTC CCTCCTCCTCGCCACCCCCGCGCCCCCCCTCCCCATCACCCCTCCTTCCC TTCCCTCCCCCCTACCCTCCTTCTCACCTCTGCTGCCACCCCCCTTCTCC TG	CGGGGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCAGTTGGCAAATTCCGGG TGGTCTGTCAATAGTTACAGAAAGGAGTAAACTGTTAATGTAATGTTGTG AAAAACAGGAGTGACTCCAAAGAGTGGCTAGAGGAGAGGAGCTATGGGAA GTCAAGTAGGGGTCCAGCATCTTCCCTTTAGAACATGGGATGGGAAAAGC TAACATCTTCTTAATGGAAGAAGTAAAGAAGATGGTGGATGACTTGATAA GGGGTCAACAACTGTTGAACTCTAAGCATCAAAGTGCCTGTTTAGGAAGC TGTAAGAGAAGTTAACTAAATCTGTCACAACTGGAAACCAGTAGATAAGT GTTAAAAACCTAAGACATCAGGAAAAGAGAATATGGGTGTGTCTTAGTCA GGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTTGGGGAAGA AAGGGTTTATTCAGCTTACACTTTCCACATTGTTGTTGATCACCAAAGGA TGTCAGGACTGGAACTCAAGCAGATCAGGAAGCAGGAGCTAATGCAGAGG CCATGGAGGGATGTTACTTACTGACTTGCTTCCCCTGGCTTGCTCAGCTT GCTTTCTTGCCGATCCCAGGACTACCAACCCAGAGATGGTACCTCCCAAA GGGCCCTTCTCCCCCTTGACCCTAACTGAGAAAATGCCTTTAAAGTTGGT CTGCAT
quality values	Open. Hide. 0 0 3 6 3 6 10 10 14 12 12 11 11 11 9 9 9 9 8 9 9 7 8 8 8 8 3 0 3 7 7 9 6 10 12 11 9 9 6 6 6 6 6 6 8 12 12 10 6 6 6 7 6 6 9 10 14 15 3 0 3 0 3 8 8 8 8 6 6 6 6 6 9 9 9 17 10 9 9 8 8 6 6 6 10 11 8 8 8 8 3 0 3 3 0 3 15 19 25 28 37 37 37 48 50 59 59 37 37 34 34 20 20 23 32 39 41 47 59 41 41 20 24 22 33 28 22 21 24 14 12 12 22 19 19 19 19 25 40 40 46 46 37 37 42 42 42 42 48 48 48 48 43 43 29 31 28 29 33 36 36 30 35 35 35 28 30 31 31 37 37 26 25 12 12 12 12 12 12 12 11 11 11 11 11 11 11 12 22 27 37 25 25 12 12 12 25 25 37 37 46 46 46 37 37 37 37 31 31 41 41 39 39 37 33 33 28 28 31 32 24 25 25 34 34 39 40 39 39 37 27 27 16 16 16 19 22 21 27 16 15 15 24 30 37 34 34 28 28 28 34 34 43 25 25 12 11 10 13 13 13 10 11 11 21 27 47 47 39 39 35 37 37 30 30 26 32 20 25 25 43 42 42 31 31 29 31 34 37 35 25 25 12 12 11 23 17 15 15 15 28 28 44 59 59 47 32 32 28 28 28 31 37 30 39 39 48 48 50 50 59 59 59 59 28 27 12 11 10 11 8 8 8 8 8 8 15 20 28 30 34 41 32 31 39 37 36 28 32 20 20 20 32 32 39 37 37 43 37 35 28 33 33 33 33 37 32 21 21 19 15 13 13 18 26 31 24 19 15 15 11 11 11 18 16 21 15 8 8 8 8 8 8 8 8 8 8 11 11 24 30 25 26 13 13 13 24 18 17 12 11 11 25 15 13 10 15 15 18 11 11 12 12 24 21 28 21 21 14 14 19 28 22 13 11 13 13 13 13 11 10 10 11 15 10 11 15 12 12 12 12 12 21 25 20 8 8 6 6 6 15 19 23 23 27 16 15 15 8 8 7 8 8 9 12 11 11 11 12 12 9 9 9 9 9 10 8 11 8 13 13 10 12 10 13 10 10 8 8 6 6 8 6 6 8 8 8 8 8 8 8 8 16 10 9 8 10 8 8 8 8 11 12 21 21 21 10 10 10 10 9 10 10 17 15 20 13 13 8 9 9 10 10 16 12 12 6 6 8 8 8 8 10 10 10 10 11 23 13 11 11 10 10 10 18 10 6 8 6 6 8 11 8 8 8 8 8 8 16 14 18 17 17 24 25 28 33 37 32 29 25 32 30 30 15 13 8 8 8 8 12 9 10 9 9 9 9 10 8 9 9 17 15 15 8 6 6 11 19 22 23 19 11 11 11 18 19 28 21 29 24 26 25 24 19 15 14 11 11 11 7 6 6 6 13 15 9 10 8 7 6 6 8 8 9 9 19 16 21 24 22 22 19 10 9 9 13 19 19 22 22 25 28 37 28 16 15 9 9 9 10 9 9 13 18 12 10 9 11 8 10 11 11 9 17 7 7 7 8 10 13 9 8 8 10 8 8 6 10 8 8 12 9 8 10 12 18 18 8 8 6 6 8 13 22 33 30 19 13 7 7 11 15 9 9 8 8 8 8 15 8 10 8 8 6 6 8 8 15 10 15 15 16 14 8 10 8 11 17 12 12 8 9 10 10 15 10 9 9 10 12 10 10 8 7 9 9 10 9 9 9 7 7 7 7 8 7 9 9 8 8 9 10 10 11 12 10 9 8 8 7 7	Open. Hide. 8 8 8 7 7 6 10 10 10 8 8 8 8 8 8 9 21 22 26 17 14 10 10 10 15 23 3 0 3 3 0 3 27 21 12 22 9 9 9 9 8 8 7 7 9 14 15 15 25 18 23 34 34 33 36 36 33 33 33 50 42 41 25 25 10 9 9 9 9 9 11 12 12 12 9 10 19 19 31 35 39 39 39 39 39 39 44 44 57 57 57 57 57 57 57 57 59 57 54 59 59 68 57 57 57 57 48 48 47 47 47 50 50 68 68 50 54 47 47 47 57 57 54 54 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 48 47 47 47 48 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 50 50 36 43 50 59 59 59 59 59 59 52 52 52 52 52 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 59 59 68 68 68 57 57 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 62 44 33 18 11 8 8 8 8 8 10 15 30 43 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 59 57 57 59 59 59 59 59 57 57 57 57 57 57 57 57 57 43 39 39 43 59 59 59 59 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 57 57 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 68 68 68 59 59 54 59 59 57 59 59 59 59 59 59 59 59 68 68 68 68 68 68 59 59 54 54 54 54 54 57 59 59 46 46 46 48 48 53 53 48 48 48 48 43 43 32 30 39 39 43 43 48 59 59 48 46 46 46 43 59 59 44 37 37 39 39 39 47 34 34 25 25 25 34 34 57 59 46 46 43 59 59 43 43 35 35 35 42 39 48 43 47 59 57 57 57 57 57 57 48 37 37 30 30 30 37 37 37 37 37 30 34 34 35 31 28 37 37 37 28 32 39 41 37 36 33 31 31 35 39 32 28 22 27 24 27 29 36 28 25 21 23 18 15 20 30 30 28 28 28 37 28 26 24 28 18 13 21 20 24 13 13 12 21 21 32 32 20 25 25 23 16 19 11 12 15 28 32 37 37 37 37 37 39 25 28 30 37 35 28 27 27 29 32 24 19 24 28 23 24 21 19 13 13 10 10 13 19 29 37 25 13 10 8 10 10 8 8 8 10 9 9 9 9 15 11 9 8 8 10 10 10 10 11 10 9 9 9 16 11 13 14 9 9 9 13 11 18 19 17 12 10 10 10 12 11 12 14 14 12 21 11 11 10 8 8 7 7 7 9 15 22 15 15 15 15 13 11 14 14 14 15 11 11 11 15 13 8 8 8 8 8 9 10 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no390_p04.g1 MSMg01no390_p04.g1 CHROMAT_FILE:
MSMg01no390_p04.g1 PHD_FILE: MSMg01no390_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:01 2005
         (560 letters)



>mm_chr1_82985836_82986799
          Length = 964

 Score =  986 bits (510), Expect = 0.0
 Identities = 549/564 (97%), Gaps = 4/564 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcagttggcaaattccgggtggtctgtcaatagttacagaaaggagtaaactgttaatg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctcagttggcaaattccgggtggtctgtcaatagttacagaaaggagtaaaccgttaatg 260

                                                                       
Query: 61  taatgttgtgaaaaacaggagtgactccaaagagtggctagaggagaggagctatgggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatgttgtgaaaaacaggagtgactccaaagagtggctagaggagaggagctatgggaa 320

                                                                       
Query: 121 gtcaagtaggggtccagcatcttcc----ctttagaacatgggatgggaaaagctaacat 176
           |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||
Sbjct: 321 gtcaagtaggggtccagcatcttccttccctttagaacatgggatgggaaaagctaacat 380

                                                                       
Query: 177 cttcttaatggaagaagtaaagaagatggtggatgacttgataaggggtcaacaactgtt 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcttaatggaagaagtaaagaagatggtggatgacttgataaggggtcaacaactgtt 440

                                                                       
Query: 237 gaactctaagcatcaaagtgcctgtttaggaagctgtaagagaagttaactaaatctgtc 296
           ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 gaattctaagcagcaaagtgcctgtttagggagctgtaagagaagttaactaaatctgtc 500

                                                                       
Query: 297 acaactggaaaccagtagataagtgttaaaaacctaagacatcaggaaaagagaatatgg 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaactggaaaccagtagataagtgttaaaaacctaagacatcaggaaaagagaatatgg 560

                                                                       
Query: 357 gtgtgtcttagtcagggtttctattcctgcacaaacatcatgaccaagaagcagttgggg 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgtcttagtcagggtttctattcctgcacaaacatcatgaccaagaagcagttgggg 620

                                                                       
Query: 417 aagaaagggtttattcagcttacactttccacattgttgttgatcaccaaaggatgtcag 476
           | |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 aggaaaaggtttattcagcttacactttccacattgttgttgatcaccaaaggaagtcag 680

                                                                       
Query: 477 gactggaactcaagcagatcaggaagcaggagctaatgcagaggccatggagggatgtta 536
           ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| 
Sbjct: 681 gactggaactcaagcaggtcaggaagcaggagctgatgcagaagccatggagggatgttc 740

                                   
Query: 537 cttactgacttgcttcccctggct 560
           ||||||||||||||||||||||||
Sbjct: 741 cttactgacttgcttcccctggct 764


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 964
Length adjustment: 10
Effective length of query: 550
Effective length of database: 954
Effective search space:   524700
Effective search space used:   524700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information