Query= MSMg01no390_p10.b1 MSMg01no390_p10.b1 CHROMAT_FILE:
MSMg01no390_p10.b1 PHD_FILE: MSMg01no390_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:02 2005
(437 letters)
>mm_chr1_87840205_87841042
Length = 838
Score = 768 bits (397), Expect = 0.0
Identities = 428/439 (97%), Gaps = 3/439 (0%)
Strand = Plus / Minus
Query: 1 agcaaagaaataagccacaaggatgagggatgcagaattcctgttacccaggaacacatg 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 638 agcaaagaaataagccacaaggatgagggatgcggaattcctgttacccaggaagacatg 579
Query: 61 gaagccttaatgtttgctactaagcttctggtcaaatgagtgatgttccatccacacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaagccttaatgtttgctactaagcttctggtcaaatgagtgatgttccatccacacaat 519
Query: 121 gaattcagggaggctattagagagaactgagtcatgtatactcatgaggaacaattgcta 180
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 518 gaattcagggaggctactagagagaactgagtcatgtatactcatgaggaataattgcta 459
Query: 181 agaaattttgttcactgaaaaagcaagggacagaactgtagtatagtg--tttttttttt 238
||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 458 agaaactttgttcactgaaaaagcaagggacagaactgtagtatagtgtttttttttttt 399
Query: 239 aattcaaagatgttcatatttatgtatatgtttataaaaatatgattgtaactaaagact 298
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aattcaaagatg-ccatatttatgtatatgtttataaaaatatgattgtaactaaagact 340
Query: 299 cctggagaaaatctactgtcgtgtatggttagctctggaaaatacaactgaggccctagg 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 339 cctggagaaaatctactgtcgtgtatggttagctctagaaaatacaactgaggccctagg 280
Query: 359 gtgcagtggcggcgtgtgcttttgtattcttcagatatacgcccaaattgcttttttagc 418
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtgcagtagcggcgtgtgcttttgtattcttcagatatacgcccaaattgcttttttagc 220
Query: 419 ttaattttttttctttcag 437
|||||||||||||||||||
Sbjct: 219 ttaattttttttctttcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 838
Length adjustment: 9
Effective length of query: 428
Effective length of database: 829
Effective search space: 354812
Effective search space used: 354812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_p10.g1 MSMg01no390_p10.g1 CHROMAT_FILE:
MSMg01no390_p10.g1 PHD_FILE: MSMg01no390_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:02 2005
(243 letters)
>mm_chr1_87671004_87671646
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 atggggattttatgttgttggtttgttttttaagtgtctcatctagttataatctagctt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 atggggattttatgttgttggtttgttttttaagtgtctcgtctagttataatctagctt 260
Query: 61 tgcactctgggggtgatttatggtgtaatcatcataaaataagtctgggccaatccacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcactctgggggtgatttatggtgtaatcatcataaaataagtctgggccaatccacac 320
Query: 121 tggtgaccaactgggatataaagcccgactgtaacgttaatgaagatgctacactgttag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cggtgaccaactgggatataaagcccgactgtaacgttaatgaagatgctacactgttag 380
Query: 181 cactttacactgcacgaaagcaatttttacctcttttaatctgtagctcgtttcttgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactttacactgcacgaaagcaatttttacctcttttaatctgtagctcgtttcttgaac 440
Query: 241 agt 243
|||
Sbjct: 441 agt 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
