Query= MSMg01no391_b09.b1 MSMg01no391_b09.b1 CHROMAT_FILE:
MSMg01no391_b09.b1 PHD_FILE: MSMg01no391_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:11 2005
(344 letters)
>mm_chr1_186538240_186538983
Length = 744
Score = 586 bits (303), Expect = e-172
Identities = 338/357 (94%), Gaps = 15/357 (4%)
Strand = Plus / Plus
Query: 1 aaaaatgtcctgaatattgctatataataacgtgactccctcaccagtactaaact-a-- 57
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct: 187 aaaaatgtcctgaatattgttatatagtaacgtgactccctcaccagtactaaacttact 246
Query: 58 ta-----------tacttacagcttactgttgccctttacatatgcagaaacagctatca 106
|| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tacagcttactgttacttacagcttactgttgccctttacatatgcagaaacagctatca 306
Query: 107 tggatacaggagtggttgctgtttaaacagaggcatggttactgtttaactctatgtaat 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tggatacaggagtggttgctgtttaaacagaggcatggttactgtttaactctatgtaat 366
Query: 167 gcgttcttcacagtcacctggaaggggcagggttattactactattcctacttcagcatt 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gcgttcttcacagtcacctggaaggggcagggttattactactattcctacttcagcatt 426
Query: 227 tttcagagtactttttttttaattgtgtgtatgtccgtgtgtgagtgcaatgcccctggg 286
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 427 tttcagagtactttttttt-aattgtgtgtatgtccgtgtatgagtgcaatgcccctggg 485
Query: 287 gagtccagaagagaatggtggatccctggagctggagttacaggtcattgggaactg 343
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 486 gagtccagaagagaatggtggatctctggagctggagttacaggtcattgggaactg 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_b09.g1 MSMg01no391_b09.g1 CHROMAT_FILE:
MSMg01no391_b09.g1 PHD_FILE: MSMg01no391_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:11 2005
(282 letters)
>mm_chr1_186658780_186659461
Length = 682
Score = 464 bits (240), Expect = e-135
Identities = 270/280 (96%)
Strand = Plus / Minus
Query: 3 tgttgcccagattggcacaaactcttaaatttcttgcctctgagtctccagtgtttggat 62
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 482 tgttgccgagattggcacaaactcttaaatttcttgcttctgagtctccagtgtttggat 423
Query: 63 tataggtgctagaaatgccaaaccattttctaagatgagcctgctgagttgtacttcctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tataggtgctagaaatgccaaaccattttctaagatgagcctgctgagttgtacttcctc 363
Query: 123 ccttcaggggtccactgggtaagtttggtgttagtccttaccacattgattctttgtgtg 182
|||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct: 362 ccttcaggggtccactgggtaagtttagtgttagtccttatcacattgattcattgtgtg 303
Query: 183 cagtaggcacaggcctgatagagggatgcctgtcatcagggggatggcacaggttggttg 242
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cagtaggcacaggcctggtagagggatgcctgtcatcagggggatggcacaggttggttg 243
Query: 243 tttttctcttgccctgttgggtgctttctgcttttccaag 282
| |||||||||||||||||||||||||||||||||||
Sbjct: 242 gcatcctcttgccctgttgggtgctttctgcttttccaag 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
