Query= MSMg01no392_d15.b1 MSMg01no392_d15.b1 CHROMAT_FILE:
MSMg01no392_d15.b1 PHD_FILE: MSMg01no392_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(502 letters)
>mm_chr1_91825240_91826142
Length = 903
Score = 930 bits (481), Expect = 0.0
Identities = 495/500 (99%), Gaps = 1/500 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttcttc-gctccagcagctgttcgctggtgaaggcagtccgccgccgccggt 62
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttctccagctccagcagctgttcgctggtgaaggcagtccgccgccgccggt 263
Query: 63 tcttgcctgtggacgtggtgctgcctgctgcaccgccgctctgcggggtctcctccagtg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcttgcctgtggacgtggtgctgcctgctgcaccgccgctctgcggggtctcctccagtg 323
Query: 123 cgtggccggggtcttcttccttatgagcagtctggccaggcaaattgtcatctgagctgt 182
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 cgtggccggggtcttcttccttatgagcagtctgaccaggcaaattgtcatctgagctgt 383
Query: 183 aatccacatcgctctccagagagaagctctcctccttgcccttcgggtcatcttccacct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatccacatcgctctccagagagaagctctcctccttgcccttcgggtcatcttccacct 443
Query: 243 ttgactcgtctttcccttgccctcggacagccccgactgaaagcaaaaccaaacggcatt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgactcgtctttcccttgccctcggacagccccgactgaaagcaaaaccaaacggcatt 503
Query: 303 ttattacattttgaacactgccttccccagtcccttcccacttgggcacctcacccctat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttattacattttgaacactgccttccccagtcccttcccacttgggcacctcacccctat 563
Query: 363 ctccccccagcagattgtctttctaccacattaacacattgcgatttcctggcctttgag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctccccccagcagattgtctttctaccacattaacacattgcgatttcctggcctttgag 623
Query: 423 gaagggggtggggggagcgtgagaaaaagctcanaggagaggaggagacagtagaggcga 482
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 624 gaagggggtggggggagcgtgagaaaaagctcaaaggagaggaggagacagtagaggcga 683
Query: 483 cggtcctttgcccagaacca 502
||| ||||||||||||||||
Sbjct: 684 cggccctttgcccagaacca 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space: 439356
Effective search space used: 439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_d15.g1 MSMg01no392_d15.g1 CHROMAT_FILE:
MSMg01no392_d15.g1 PHD_FILE: MSMg01no392_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(333 letters)
>mm_chr1_91998202_91998936
Length = 735
Score = 594 bits (307), Expect = e-174
Identities = 328/337 (97%), Gaps = 6/337 (1%)
Strand = Plus / Minus
Query: 1 attagcatggca---tttttttaaaaagggtcatggacctagctgacatgcagaatttca 57
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 535 attagcatggcatttttttttt--aaagggtcatggacctagctgacatgcagaatttca 478
Query: 58 gtgtggatgctctttgcctgagggacaccatttgaagaatttatactaaagaaaataaca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtgtggatgctctttgcctgagggacaccatttgaagaatttatactaaagaaaataaca 418
Query: 118 aggaaggttgctgaaagctagaaatggcagg-tctttcacacaggaccagatggtaagga 176
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 417 aggcaggttgctgaaagctagaaatggcaggctctttcacacaggaccagatggtaagga 358
Query: 177 ccttaggctgggcatggatacactccgccatagctgttaaacactaccatgatggggagg 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 357 ccttaggctgggcatggatacactccgccatagctgttaaacactaccatgatgggaagg 298
Query: 237 aagacaagccacagttgtatacacatgatggggctgtgtggctctgaccagactgccatc 296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 297 aagacaagccacagttgtatacacgtgatggggctgtgtggctctgaccagactgccatc 238
Query: 297 ctcattacccctgccatagtttggtcatgtctgtctt 333
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctcattacccctgccatagtttggtcatgtctgtctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 735
Length adjustment: 9
Effective length of query: 324
Effective length of database: 726
Effective search space: 235224
Effective search space used: 235224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
