Query= MSMg01no393_c05.b1 MSMg01no393_c05.b1 CHROMAT_FILE:
MSMg01no393_c05.b1 PHD_FILE: MSMg01no393_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:56 2005
(229 letters)
>mm_chr1_140068114_140068742
Length = 629
Score = 333 bits (172), Expect = 7e-96
Identities = 196/204 (96%)
Strand = Plus / Plus
Query: 5 gaattccattgtgtactgtgaatgcatgctggccttttaaaataaagattctagctgatg 64
||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattgcctacagtgaatgcatgccggccttttaaaataaagattctagctgatg 264
Query: 65 aggaaatctcaggagtgcccacccccaccattttaatccattcagttatataaagaaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggaaatctcaggagtgcccacccccaccattttaatccattcagttatataaagaaaga 324
Query: 125 atgagattcaaactgtcatatcgctgcagacagaagaaggccaagaattgagatgatctc 184
|||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 325 atgatattcaaactgtcatattgctgcagacagaagaaggccgagaattgagatgatctc 384
Query: 185 aacagagatatgagaacagtattt 208
|||||||||||| |||||||||||
Sbjct: 385 aacagagatatgggaacagtattt 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no393_c05.g1 MSMg01no393_c05.g1 CHROMAT_FILE:
MSMg01no393_c05.g1 PHD_FILE: MSMg01no393_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:56 2005
(413 letters)
>mm_chr1_140262737_140263550
Length = 814
Score = 630 bits (326), Expect = 0.0
Identities = 391/422 (92%), Gaps = 19/422 (4%)
Strand = Plus / Minus
Query: 6 gaattcaccatgtaggcctgttttagaaataaaacaactgggtgaataagttagatatca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 791 gaattcaccatgtaggcctgttttagaaataaaacaactgggtgaataaattagatatca 732
Query: 66 tcctaaagaggcagagctggatcttgtacctttgcaatgctgactgatcactgtggtatt 125
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 731 tcctaaagaggcagagctggatcttgtacctttgcaatgccgactgatcactgtggaatt 672
Query: 126 tgaggggtctttgataatgtccctggtctcatctctgtacagtc--------tgtgcagt 177
|||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct: 671 tgaggggtctttgataatgtccctggtctcatctctgtacagtcacacgttatgggtagt 612
Query: 178 agctgtgtggccgaagtgtttttcagatgtgcctttaagaagggcatggctgctgtctga 237
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 611 agctgtgtggccgaagtgtttttcagatgagcctttaagaagggcatggctgctgtctga 552
Query: 238 tgctggattcattttatgtatataatgttatcatcattgatgtgtttctataactacaca 297
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 551 tgctggattcattttacgtatataatgtgatcatcattgatgtgtttctataactccaca 492
Query: 298 cacataggataccatttcttcaatatttgaaacagtaaatac-tttttttttca---ta- 352
||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||
Sbjct: 491 cacatagaataccatttcttcactatttgaaacagtaaatacttttttttttcagagtat 432
Query: 353 -gccccccccctactagctgagcccattacattcttaaatcaattttaatgttattattt 411
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gg-----cccttactagctgagcccattacattcttaaatcaattttaatgttattattt 377
Query: 412 at 413
||
Sbjct: 376 at 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 814
Length adjustment: 9
Effective length of query: 404
Effective length of database: 805
Effective search space: 325220
Effective search space used: 325220
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
