TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTCTCTAGATAACTATAAACTGCCTTTAGGATTTAAAAATATAGTAATG
ATGTGATCTAAAATCTCATTTAATGTGGGGAATTGGAGGCTGGTATCCAG
TTGAGGTGAAGTCTGAACCCTGATGGTCATAATTCACCTACATGACACTG
TAGGTGTTCCTTTATGCTCCTGAAACTCCAGCCCCTGCCTAAGGTACCAC
TTCCCACAGCCCCAACAAGAGAAGCATGGTCAGTAGTCACATAAGCAATG
GCCCAAGCTTCTGACCTTCAGGCTAAACTCCTCCCCAGTTATCTAGCAAC
AATGAAGACCATAAAAAGGGATGCTCAGCCCCACCTCACTCTCTTATTCC
TTTGTCCTCTTACCTCTCACTTCTCTCACTTCTCTCTCCTCTTCCCTTTC
TCTTTGTCTTCTCCTCCCCCCTTCCCTCTCTTTCTCTCTTTTCTACCTTC
TCCCTTTCCACTGAATTTCTATAATAAAGCTCTTAAATCATAGAGAGTCT
CTGCCCTTCAAGTTCTACTGTGCACTCTGGTCAGTGTTGAGAACCTCTTC
CCTTATCCCCTCTCTCCCGCAAATCTGGGGGGCTAGCAAGCTAGCTTCCG
GGAGGGGATCCCAGGTCGGGGGTGGGCCGTTTTCCACCCCTGCCTCTTGG
GTCAAGAATGGTCACCCAGGCCCTGTGTAAAAAATCCACAAACTTGTTTT
GTTTTTGCTGCCAA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATTTCAATTAAATTTTCTTCATTATCAATACA
AAAGTAATCACTAATTCCAATTTGGTGAATGAATTAAATAATGAGAAATA
CAAGGATAGAAGAAAGAATATTCTTGTCCTATTAAGGTTATAAAATATAT
ATTCCTATAAACCTACTAGAGAGATTTTTACCCAGAATTTTGGGTATGGA
GTCATTCAATTAAGGATTTTAAGCTTGACCTCAAGAAGGAGTTTTGTGTT
AAAAGCACAATTCAGATTAGTCAAACACATTCGATAAACTTTAAGCACTA
TGTTATACTGGGCTTTGAATAGAAACAAAAGAAAACATTATTCTCTAAAT
ATCTACAAAATTTTGGTGATATAAAAGCTGATGGGAATATTTAAACTCCC
ATGCTAGACAATAAAATATATTACAAATCTCTCAATATTTTCATCATATA
TCTCCCAGATTTGTCATTTTTCTTTTTTTGAAACAATTTTTATTAGATAT
TTTCTTCATTTACAATTCAAATGCTATCCAGGTAGTCCCCTATACCCTCC
CTCTGCCCTGCTCCCAAAATTCCCCACTCCTTGTTTCTGGGTCTGCCATC
CCCCTGAATTAGGNCAATACTCTTTGCAAGAACTAGGGGTTTCCTTCTCA
ACCTTTTGTTAATTATGGGGGTAGAGAAAAAAAGTTTCCGAGGTACTTGG
TCGCTTCCAATTGGTGGTTA

Query= MSMg01no393_h22.g1 MSMg01no393_h22.g1 CHROMAT_FILE:
MSMg01no393_h22.g1 PHD_FILE: MSMg01no393_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:27 2005
         (480 letters)



>mm_chr1_28324241_28325121
          Length = 881

 Score =  830 bits (429), Expect = 0.0
 Identities = 468/481 (97%), Gaps = 1/481 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atttcaattaaattttcttcattatcaatacaaaagtaatcactaattccaatttggtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttcaattaaattttcttcattatcaatacaaaagtaatcactaattccaatttggtga 622

                                                                       
Query: 61  atgaattaaataatgagaaatacaaggatagaagaaagaatattcttgtcctattaaggt 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgaattaaataaagagaaatacaaggatagaagaaagaatattcttgtcctattaaggt 562

                                                                       
Query: 121 tataaaatatatattcctataaacctactagagagatttttacccagaattttgggtatg 180
           |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 tataaaatatatattcctatgaacctactagagagagttttacccagaattttgggtatg 502

                                                                       
Query: 181 gagtcattcaattaaggattttaagcttgacctcaagaaggagttttgtgttaaaagcac 240
           ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gagtcattcaactaaggattttaagcttgacctcaagaaggagttttttgttaaaagcac 442

                                                                       
Query: 241 aattcagattagtcaaacacattcgataaactttaagcactatgttatactgggctttga 300
           ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 441 aattcggattagtcaaacacatttaataaactttaagcactatgttatactgggctttga 382

                                                                       
Query: 301 atagaaacaaaagaaaacattattctctaaatatctacaaaattttggtgatataaaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagaaacaaaagaaaacattattctctaaatatctacaaaattttggtgatataaaagc 322

                                                                       
Query: 361 tgatgggaatatttaaactcccatgctagacaataaaatatattacaaatctctcaatat 420
           |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 321 tgatgggaatatttaaactcccatgctacacaataaaatatattacaaacctctcaatat 262

                                                                       
Query: 421 tttcatcatatatctcccagatttgtcatttttcttttttt-gaaacaatttttattaga 479
           |||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct: 261 tttcatcatatatctcccagatttgtcattttccttttttttgaaacaatttttcttaga 202

            
Query: 480 t 480
           |
Sbjct: 201 t 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space:   409370
Effective search space used:   409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)