| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-394J04.T7 (MSMg01no394_j04.b1) | MSMg01-394J04.TJ (MSMg01no394_j04.g1) |
|---|
| ACC | AG495598 | AG495599 |
|---|
| length | 860 | 751 |
|---|
length of high quality
(start - end) | 155 (77 - 231) | 245 (84 - 328) |
|---|
| definition | CHROMAT_FILE: MSMg01no394_j04.b1 PHD_FILE: MSMg01no394_j04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:39:59 2005 | CHROMAT_FILE: MSMg01no394_j04.g1 PHD_FILE: MSMg01no394_j04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:40:00 2005 |
|---|
| singlet/doublet | singlet | singlet |
|---|
| BLAST hit | plural | plural |
|---|
| Map location. | (85,279,256 - 85,279,410) | (85,241,554 - 85,241,796) |
|---|
| sequence | CCGCATTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
GCGCGGAATTCTTTAAATTCCCAGACTGACAGCTCTATGTGACTATAAAA
GACTTTGTTTTCTTTTCTTCTTAGCAAGAAGAAAAAAACATCCGAACTGG
TCAAATTCCAAAAGAAGACAGCAGAATAAAAAGCCCCGTCAAGATGAGAT
GATGGGTAAGGGGATGCTGGAGGAGACTCCAGTAAGGGGTTACAGGAGCA
GGCTTCTTTACAGGCTGCACATCTGACGGACTTCGTCCTGAACTCACTAT
ATAGGCAGCGCACACAAGATTTCTTGTCTTTTTTTTTCAACTGGCCTTTA
CACTTCCCCACATTTGCCTCCGTTTCTGATTCAACCTGCTGATCTGTCAC
CTTGTTGCCATTCCTCGCTCTTGATTTTATACCCCCCCCTCTCCGTTCTT
TTTTGTATATTGCCCCGTTTCTCCTTCACTTATTCTACTTTTCTTCACGT
CCGTTCCTCCCTTTCCACCTTTCTCTTACTTTCTTAGATTCACCTTCACC
CTCTGATCCCTTCCTCCTTCTTCCGTTGTCTTCCCCATCTTTTTTCTCTC
CCCCCCTTTCCCCTCGATCTTTCCCCTCCCCCCTCTTCCCCCGGTCCCTC
CCCGTCCCTACTATTATGTTCCCCTCTTTCCTTTTCTCTCGTTCCCATTA
TTNTCCTCCTTTACCGCTTTCTCCTACTTATCAATTGCTTTTATTATTCG
CTCGGACTCTTTTCTTCCTCCTTCTTTCCTCTAACTTTACTTTATTTCCC
CTCTCTTCCATCTTCTTATCTCTCCATTTGTTTGACGTCATACTTCTCAT
AATTCACCGT
| TTTTTTTTCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAAAACTCATCCTCT
GCTCTCCACAATACTCATCCTCTGACCTACATACGCACCCTTTGGCCCAT
GAGTCCTTTCGTAACAGTGCGGGTTGCCTATGCATAGTTATGTCTGTATA
TGGGTGTTTTGTTTTGCTTGCATGTATAGCTGTGTACCACGATCATGCCT
GGTGCTCCCGGAGGCTAGAAGAAGTCATTGGATCTCCTTGAGCTGGAGTT
AAAAGATCATTTTGAGCCACCATGTGTATTTTTTGAATCAAAACCTGGGT
CCTCTGGAAGAGCAGCCAGTGCTCCTTAAACTTTGAGTCGTCTGGGAAGA
GCCTGGATTTCTAGAAACAACCCCCACCCACACNCTGGAGATTTTCAGTG
TAGGGTGAGCAACATTCTCTAACACTGATTCTCAGCACTGTCCCTCAGCG
GTCATACATTTTATTTTTATAGGAGGGCCTAAAGATGACCTTTATCACTC
CCCCTACTTCAGCCCATGTCTGTCTATATCTTAGTAGCTTTACCCTACTT
TGATCATCTCGTGTCGTTATTTAATACACTCATGTCTTTCTTCTCGGCAC
AGGAACTCTGATTTCATCTCCCCCCCCCGTTACTTATGAGATGCCCCCGC
CTTCCCTTATTCTGTACCCCCTCTCTGTACTATTCCTACCCCTGTTTCTT
C
|
|---|
| quality values | Open.Hide. 6 6 6 6 8 6 6 7 8 8 8 11 19 19 31 28 21 17 13 11 11 11 26 25 27 25 26 29 32 32 28 19 10 8 8 8 6 6 6 6 6 8 11 11 11 11 12 12 10 10
10 10 10 19 30 27 21 21 21 29 29 41 27 23 11 9 6 6 7 7 7 6 10 10 22 21 30 24 24 23 26 28 30 43 57 57 57 59 43 41 41 43 43 48 48 43 59 43 43 39
42 42 48 48 42 43 39 48 48 59 59 59 59 54 57 54 48 48 48 48 30 34 14 14 12 21 19 28 36 30 32 42 44 43 43 44 44 47 47 57 47 47 47 47 47 57 57 57 44 44
35 35 37 44 50 57 57 50 37 37 43 44 57 44 44 32 23 23 27 27 19 23 17 12 12 9 9 9 15 24 42 43 44 44 43 42 40 28 27 20 20 25 32 42 32 32 17 17 17 32
32 42 43 38 37 32 30 28 41 41 30 22 28 28 36 36 36 48 46 46 39 37 32 25 25 25 25 21 21 25 30 24 18 13 12 12 12 12 12 11 11 18 18 18 16 12 11 11 11 12
13 11 15 13 19 11 11 8 8 8 8 8 8 9 17 17 10 11 11 16 19 19 26 13 18 12 20 16 24 12 12 12 19 15 11 11 11 11 19 16 11 11 16 16 19 12 13 15 19 15
12 12 12 12 12 9 9 9 9 9 9 9 15 16 19 19 19 19 20 20 32 32 26 25 13 10 8 8 8 15 19 16 17 15 9 8 8 10 11 11 15 21 12 12 13 15 12 13 12 8
8 8 8 9 14 11 12 11 12 12 12 12 12 12 12 8 8 8 8 8 8 10 15 11 11 10 6 6 6 6 10 8 8 8 8 8 6 8 8 6 11 11 11 10 13 11 11 9 9 9
9 10 10 10 11 11 8 8 8 8 8 10 14 12 10 6 6 8 8 9 6 8 8 10 10 10 17 13 13 9 9 9 13 15 19 14 14 17 8 8 8 6 6 6 6 6 8 12 19 12
10 10 8 6 6 8 8 8 8 8 10 15 15 12 11 9 9 9 13 11 10 9 10 16 15 11 6 6 6 8 10 10 9 11 11 11 11 10 9 8 8 6 6 8 8 8 6 8 6 6
8 8 11 10 12 15 15 10 10 10 8 8 8 8 8 6 6 6 10 7 9 10 10 18 15 11 9 10 10 10 15 13 12 10 10 8 9 9 10 8 8 7 7 8 10 8 8 9 9 15
9 9 9 9 9 9 9 12 14 18 10 9 9 9 10 9 10 14 10 10 10 12 17 15 8 8 6 6 6 8 8 10 13 10 12 12 10 12 9 9 9 19 16 19 20 10 8 8 8 8
8 8 15 10 11 19 15 15 10 12 12 15 17 13 8 8 8 8 10 10 11 12 16 16 15 15 10 11 11 14 13 17 18 20 24 23 15 10 10 10 11 9 8 8 8 8 8 12 11 11
10 10 8 8 8 10 8 8 9 9 9 9 9 9 11 11 10 9 9 10 13 16 10 11 11 11 11 17 13 15 14 14 10 10 9 9 11 13 12 9 9 9 8 8 12 10 9 9 8 8
8 3 0 3 9 10 9 10 10 8 9 8 8 8 8 6 6 10 7 8 13 7 6 8 8 8 8 8 8 8 7 8 9 9 9 10 10 10 15 9 13 9 8 6 6 6 6 11 6 8
8 8 8 8 6 8 6 7 8 8 10 10 12 10 12 9 9 10 10 15 10 10 9 9 9 13 15 12 10 9 9 9 9 9 10 15 12 9 9 9 13 10 9 9 6 11 8 8 8 8
8 9 13 8 7 7 10 10 8 8 8 8 8 7 9 8 8 7 7 7 6 6 6 6 8 8 8 6 6 6 8 11 8 8 8 8 8 8 7 7 6 6 8 8 8 6 6 6 6 6
6 8 8 6 6 6 8 6 6 6 | Open.Hide. 7 7 7 6 8 10 10 6 6 7 10 10 8 8 8 8 8 21 27 37 39 39 41 41 41 41 46 50 50 53 50 50 50 50 42 47 27 25 16 11 11 10 10 12 10 9 9 11 12 19
16 18 12 15 25 27 41 47 41 41 50 50 59 33 27 12 9 7 7 6 7 7 9 8 12 18 14 10 10 19 22 30 33 37 37 37 37 48 48 44 36 34 36 36 37 42 57 48 46 46
46 46 48 57 42 42 42 42 48 48 48 48 54 43 43 43 47 47 47 57 54 54 40 43 25 25 25 29 32 32 47 47 57 57 57 54 46 46 44 46 48 59 44 59 44 28 32 37 30 48
48 48 48 37 42 43 46 57 44 43 43 50 50 57 57 57 57 57 43 43 43 43 43 59 44 44 52 52 52 57 57 57 57 57 57 59 59 68 68 68 57 57 52 52 57 57 59 59 57 57
57 57 57 57 59 59 59 59 59 59 57 57 57 59 59 57 57 57 59 59 68 59 59 57 57 57 57 57 52 52 52 59 59 59 59 43 50 47 50 57 57 57 48 48 48 57 57 57 57 59
59 57 59 46 57 42 57 47 42 30 28 28 28 32 26 42 42 43 54 59 59 68 57 57 57 57 54 59 59 57 44 40 28 28 37 37 43 46 43 59 54 54 59 59 54 54 54 57 57 48
48 48 47 43 43 43 43 39 47 57 57 57 57 59 47 44 43 40 40 40 40 39 30 26 11 11 11 10 10 13 16 12 12 9 11 12 23 25 37 37 40 40 43 43 48 48 41 32 24 18
18 28 28 29 29 30 28 43 43 43 43 48 43 28 28 12 12 13 21 30 39 43 43 43 43 32 34 32 37 37 36 37 46 59 44 40 28 25 25 25 28 28 25 21 13 13 13 28 26 37
35 30 24 30 19 31 33 30 30 39 25 25 24 24 28 24 21 13 15 15 24 23 21 7 6 6 6 6 6 7 7 8 3 0 3 22 11 12 12 18 19 34 37 37 41 28 28 25 28 26
33 33 29 25 22 22 24 31 31 26 19 12 12 12 23 16 18 18 14 14 13 13 19 11 11 11 12 21 15 20 18 23 12 11 10 10 11 11 13 10 10 10 11 25 27 25 18 14 14 24
21 13 11 11 11 11 16 16 24 24 30 24 34 28 28 28 33 21 21 13 18 15 15 12 12 11 11 10 10 10 10 12 10 10 9 11 12 12 16 15 10 8 8 8 8 8 8 6 6 8
10 10 12 9 8 8 8 8 8 10 9 9 9 10 12 19 11 9 9 11 18 23 20 20 18 16 10 10 15 13 11 12 8 8 8 8 8 8 8 8 10 12 12 15 10 8 8 8 8 8
11 12 9 9 8 8 8 8 8 8 8 8 8 10 8 8 8 9 8 8 8 8 8 6 6 8 8 10 10 8 8 10 10 10 10 11 16 10 10 8 8 8 8 8 8 11 8 8 8 8
8 8 8 8 10 10 10 10 10 10 16 19 10 8 8 8 8 11 12 13 8 12 12 11 11 11 11 12 9 10 10 8 8 8 8 10 10 12 10 10 11 11 11 12 12 10 10 10 10 10
10 10 13 15 18 10 12 10 8 8 8 10 8 8 8 8 8 8 10 10 10 10 8 8 6 6 8 8 8 8 8 6 6 10 10 10 8 12 12 16 10 10 9 9 8 8 10 10 12 12
12 |
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