Query= MSMg01no399_d08.b1 MSMg01no399_d08.b1 CHROMAT_FILE:
MSMg01no399_d08.b1 PHD_FILE: MSMg01no399_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:10 2005
(267 letters)
>mm_chr1_163476876_163477542
Length = 667
Score = 460 bits (238), Expect = e-134
Identities = 256/264 (96%), Gaps = 5/264 (1%)
Strand = Plus / Plus
Query: 7 ggaattcaggaattcc---atggctcccccagatgctgtgtcaaagccctcccagggact 63
|||||||||||| || ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 206 ggaattcaggaa--ccaagatggctcccccagatgctgtggcaaagccctcccagggact 263
Query: 64 ttctcttctttataacaccctgtacccagtggcttattaaatcttttttgaatgctcatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttctcttctttataacaccctgtacccagtggcttattaaatcttttttgaatgctcatt 323
Query: 124 taccactgctttatatacgtcttcatacgctcttatctagatttttatattagcttcatt 183
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taccactgctttatataggtcttcatacgctcttatctagatttttatattagcttcatt 383
Query: 184 actaacaattccttcctcctaatatctatccattctttacattgattccatatgctttag 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 384 actaacaattccttcctcctaatatctagccattctttacattgattccatatgctttag 443
Query: 244 aacatacactattttgttgcttca 267
||||||||||||||||||||||||
Sbjct: 444 aacatacactattttgttgcttca 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no399_d08.g1 MSMg01no399_d08.g1 CHROMAT_FILE:
MSMg01no399_d08.g1 PHD_FILE: MSMg01no399_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:10 2005
(241 letters)
>mm_chr1_163642387_163643027
Length = 641
Score = 439 bits (227), Expect = e-128
Identities = 237/241 (98%), Gaps = 2/241 (0%)
Strand = Plus / Minus
Query: 1 tctctctctctctctctttctctctctctctctctctctcccacacacacatcttttcta 60
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 482 tctctctctctctctctctctctctctctctctctctctcc--cacacacatcttttcta 425
Query: 61 tatccctctttaaaccagaaagaaatgctcaacacatttgctattcaaaaatgggacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tatccctctttaaaccagaaagaaatgctcaacacatttgctattcaaaaatgggacatt 365
Query: 121 gtttttctcccttaactcctttgctggactagctgcatggtttcttttgaagctctccac 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 364 gtttttctcccttaactcctttgctggagtagctgcatggtttcttttgaagctctccac 305
Query: 181 ttaaattccccaagaattccagggtttacccggcacagagaaggacggtgctaaatatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttaaattccccaagaattccagggtttacccggcacagagaaggacggtgctaaatatag 245
Query: 241 a 241
|
Sbjct: 244 a 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
