Query= MSMg01no400_i11.b1 MSMg01no400_i11.b1 CHROMAT_FILE:
MSMg01no400_i11.b1 PHD_FILE: MSMg01no400_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:52 2005
(491 letters)
>mm_chr1_94912882_94913773
Length = 892
Score = 886 bits (458), Expect = 0.0
Identities = 483/496 (97%), Gaps = 9/496 (1%)
Strand = Plus / Minus
Query: 1 tgccatatgggtagccaccctcatgcatggccaccctcatccccaggacttgagctaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tgccatatgggtagccaccctcatgcatggccaccctcatccccaggacttgagctaata 633
Query: 61 gtcattagcatcaagtgtcagggaaccctctccatgaagtatagaataagactcattccc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtcattagcatcaagtgccagggaaccctctccatgaagtatagaataagactcattccc 573
Query: 121 aagaatccaaatcaaggtacccatcccagagcaagattaaactagaaaccaggtgacctg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aagaatccaaatcaaggtgcccatcccagagcaagattaaactagaaaccaggtgacctg 513
Query: 181 agctgtccgcggtggactgtggaggcaggaggttgagatacaaagtggagagaagacacc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 512 agctgtccgcggtggactgtggaggcaggaggttgagatacaaagtggggagaagacacc 453
Query: 241 tgtgtta-----ttttctcactctggtgctcatgaccaggagggaaggagcgggttgctt 295
||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtgttaagaag----ctcactctggtgctcatgaccaggagggaaggagcgggttgctt 397
Query: 296 caatttcttggttcccaagggccacacagcccccagcaggcagaaaggcagtcatggctt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 caatttcttggttcccaagggccacacagcccccagcaggcagaaaggcagtcatggctt 337
Query: 356 gccacactcgctcaggtcaaccagcctgaagctgaggccttgcaagagtccagctccacc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gccacactcgctcaggtcaaccagcctgaagctgaggccttgcaagagtccagctccacc 277
Query: 416 caggaggtgggtgtctgaggccagccaacctacagagcacctgtgcctgggtcgggttat 475
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 276 caggaggtgggtgtctgaggccagccaacctccagagcacctgtgcctgggtcgggttat 217
Query: 476 agaaaggttgggagct 491
||||||||||||||||
Sbjct: 216 agaaaggttgggagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 892
Length adjustment: 10
Effective length of query: 481
Effective length of database: 882
Effective search space: 424242
Effective search space used: 424242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_i11.g1 MSMg01no400_i11.g1 CHROMAT_FILE:
MSMg01no400_i11.g1 PHD_FILE: MSMg01no400_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:52 2005
(219 letters)
>mm_chr1_94721871_94722489
Length = 619
Score = 424 bits (219), Expect = e-123
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 1 aaggctgtacaacttgctctccagacccgtgtggtgcctccccttataacaagactctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggctgtacaacttgctctccagacccgtgtggtgcctccccttataacaagactctac 260
Query: 61 cttatgggcctgtctcttcctgccttaggccagtgcctatagtgcagacctgagtcctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttatgggcctgtctcttcctgccttaggccagtgcctatagtgcagacctgagtcctga 320
Query: 121 tccagtgcaagcctgggtcctcctcagcctgtgtgctgccagcaagagtttcagaggcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagtgcaagcctgggtcctcctcagcctgtgtgctgccagcaagagtttcagaggcca 380
Query: 181 ctgacacctcccaagcaggcctgggactcctagcccaga 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgacacctcccaagcaggcctgggactcctagcccaga 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
