Query= MSMg01no400_p19.b1 MSMg01no400_p19.b1 CHROMAT_FILE:
MSMg01no400_p19.b1 PHD_FILE: MSMg01no400_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:29 2005
(411 letters)
>mm_chr1_93474726_93475536
Length = 811
Score = 712 bits (368), Expect = 0.0
Identities = 401/412 (97%), Gaps = 2/412 (0%)
Strand = Plus / Minus
Query: 1 tgaaccaggatgtgaagggaggggaagggcctccttgcacccagcagttgtcctcaaagc 60
||||||||||||||||| | ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 611 tgaaccaggatgtgaagcg-ggggaagggcctccttgcaaccaacagttgtcctcaaagc 553
Query: 61 agttctcatctcttctgtcctctacccacagcccctgctggccccacagcgacactggct 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 552 agttctcatctcttctgtcctctatccacagcccctgctggccccacagcgacactggct 493
Query: 121 ctgtggaatcagaacaacccagggccccagcttttagaattctcagggctggatcaggcc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctgtggaatcagaacaatccagggccccagcttttagaattctcagggctggatcaggcc 433
Query: 181 ttgtc-ggggggataagggggaaatcagccctgcagtagaaggattccttatgtctaagt 239
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttggcgggggggataagggggaaatcagccctgcagtagaaggattccttatgtctaagt 373
Query: 240 ccttggtgattttttattgagaggaggcccacagactccctctggggaacaggccctaca 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccttggtgagtttttattgagaggaggcccacagactccctctggggaacaggccctaca 313
Query: 300 ggaagggaggccatgaaaatagctgctgactgccatggtgagccgaccttgcagggtgca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggaagggaggccatgaaaatagctgctgactgccatggtgagccgaccttgcagggtgca 253
Query: 360 ggaggacccacagtccaggtcattccagtccagctccgggcctttctgagtg 411
|||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 252 ggaggacccacagtccaggtcactccagcccagctccgggcctttctgagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_p19.g1 MSMg01no400_p19.g1 CHROMAT_FILE:
MSMg01no400_p19.g1 PHD_FILE: MSMg01no400_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:29 2005
(411 letters)
>mm_chr1_93304198_93305008
Length = 811
Score = 795 bits (411), Expect = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 1 cataggaaagaggggatgactcacaaatgaatcctaacaaccaagcaactcagctctaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataggaaagaggggatgactcacaaatgaatcctaacaaccaagcaactcagctctaag 260
Query: 61 tgatgctactaatatctgcaggcagggtcccctcacagacacaaggggcacatgtcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatgctactaatatctgcaggcagggtcccctcacagacacaaggggcacatgtcaagt 320
Query: 121 tgcaactctgactgcacagcaaggcgtcacaccctcagccactggtggcaaggacagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaactctgactgcacagcaaggcgtcacaccctcagccactggtggcaaggacagtga 380
Query: 181 ctcggtgctggctcggtagcagatgttccttgggaggaatgttggccagctggtcacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcggtgctggctcggtagcagatgttccttgggaggaatgttggccagctggtcacagc 440
Query: 241 ctcagttctatttagccaggtcaaccagggtgctaggtactcaatggtcagcaaggggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcagttctatttagccaggtcaaccagggtgctaggtactcaatggtcagcaaggggag 500
Query: 301 agccaggccagaagaccctggtggggaggcgtggtcactggaagggtgcattgttgttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agccaggccagaagaccctggtggggaggcgtggtcactggaagggtgcattgttgttgg 560
Query: 361 catatgtggcttgtgtgttttgaggtacattggagaccatcctctgatgac 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catatgtggcttgtgtgttttgaggtacattggagaccatcctctgatgac 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
