NGGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAATGAAGTACCCATCTGATGAAGAGTAATTTTAACATATTTA
GTTGGGCAAAGCCAAGGAAAGAATTGACAATACATGTGTTTATATTAGGG
GAATGATTGAGTTTATGTTTATAATCTATGTGGGAGGGGCAATGACAAAA
TCTAGAATATCAAGCTTAAAGAAAATTGTTTTAAATGAGGAAGAAGAAGG
TTAAAGATTAGTTTCCCATTCACAAAGATCTTCCTGGGCTCCACAGAGTC
TTGAGACTTTTGAAAGATTTGCCAGATGTCAGTGAATAGCATTGGAGTGA
GACTAAGTGTATAGAACACAGAGTTTATTGTGTGGAGGATGTTAGTCAGA
TGTCACAGACTAAGACACAGTGAGGAAGGATCCTGTACCTACAAATGGCT
ATCCATTTTCAAAGTCTTTATTCTGTTTTGTGTCTAAATTATATCTCCAT
CAATATTTATATTTGTTTTGGGATCTCTGGCAGGGCTTTGCTCCTGTCCT
GTTACTATTAAGCTAATCTAAAGTTTCCTCAATTTCCTGATGAGGAATTC
TCACCAAGAACTCTACCTCTGCTCTGATACTTCTACCATTAAATAGGACA
TTTCAGATCTCTCTAGACAGACCACTATTTCTGTATTTATTGAATCAGCC
CTGCACTTTCGCAATCTCTTGGCCTTATTGG

TTCCGATGATTGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTAA
CATGAATGGGTGTTGGATTTTGTCAAATGCTTTCTCCGCATCTAACAAGA
TAATCATGCGATTTTTTGTCTTTGATTTGTTTATATAGTGGATTTTGTTG
ATGGATTTCCATATATTAAACCATTCCTGCATCCCTAGAATGAAACCTAC
TTAGTCAGGATGGATGATTGTTTTGATGTGTTTTTGGATTTGGTTAGGGA
GAACTTATTGAGGATTTTTGTTTTGATATTCATCAGGGAAATTGGTCTGA
AGTTCTCTATCTTTGTTGGGTCTTTTTGTCATTTAGGTATCAGAGTAATT
GTGGCTTCATAGAATGAGTTTTGTAGAGCACCTTCTGCTTCTATTTTGTA
AAATAGTTTATGAAGAACTGGTATTAGATCTTCTTTGAAGGTCTGATATA
ACTCTGCACTAATCCCATTTGGTCCTGGGCTTTTTTCTTCTTTTCTCTTC
TTTCTCTTTCCCCCCAAATCATCTCCTTATTGGCCCCCTTTTTTTTAACG
TTTTTCTTCCCCTCCTCTCCATTCTTTCATTTTTGTTCCCCCCCCTCTAT
TATTTTTCTTCTTCCTCTTTCTTCTAACACTCCTTTTCTCTCTTCCATCC
TACGATTCTTCCCCCCTTTTTATTCGATTTTCCACCCCTTTTTCTTCCTT
ACACTTTCTCCACATTCTT

Query= MSMg01no402_i21.b1 MSMg01no402_i21.b1 CHROMAT_FILE:
MSMg01no402_i21.b1 PHD_FILE: MSMg01no402_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:29 2005
         (481 letters)



>mm_chr1_97503324_97504205
          Length = 882

 Score =  876 bits (453), Expect = 0.0
 Identities = 474/481 (98%), Gaps = 1/481 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaagagtaattttaacatatttagttgggcaaagccaaggaaagaattgacaatacat 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 atgaagagtaattttaacatatttagttaggcaaagccaaggaaagaattgacaatacat 622

                                                                       
Query: 61  gtgtttatattaggggaatgattgagtttatgtttataatctatgtgggaggggcaatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtttatattaggggaatgattgagtttatgtttataatctatgtgggaggggcaatga 562

                                                                       
Query: 121 caaaatctagaatatcaagcttaaagaaaattgttttaaatgaggaagaagaaggttaaa 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaatctagaatatcaagcttaaagaaaattgttttaaatgaggaagaagaaggttaaa 502

                                                                       
Query: 181 gattagtttcccattcacaaagatcttcctgggctccacagagtcttgagacttttgaaa 240
           |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 gattagtttctcattcacaaagatcttcctgggctccgcagagtcttgagacttttgaaa 442

                                                                       
Query: 241 gatttgccagatgtcagtgaatagcattggagtgagactaagtgtatagaacacagagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatttgccagatgtcagtgaatagcattggagtgagactaagtgtatagaacacagagtt 382

                                                                       
Query: 301 tattgtgtggaggatgttagtcagatgtcacagactaagacacagtgaggaaggatcctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattgtgtggaggatgttagtcagatgtcacagactaagacacagtgaggaaggatcctg 322

                                                                       
Query: 361 tacctacaaatggctatcca-ttttcaaagtctttattctgttttgtgtctaaattatat 419
           ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctacaagtggctatccagttttcaaagtctttattctgttttgtgtctaaattatat 262

                                                                       
Query: 420 ctccatcaatatttatatttgttttgggatctctggcagggctttgctcctgtcctgtta 479
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccatcaatatttatatttgtttagggatctctggcagggctttgctcctgtcctgtta 202

            
Query: 480 c 480
           |
Sbjct: 201 c 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space:   410712
Effective search space used:   410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)