Query= MSMg01no402_p01.b1 MSMg01no402_p01.b1 CHROMAT_FILE:
MSMg01no402_p01.b1 PHD_FILE: MSMg01no402_p01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:02 2005
(169 letters)
>mm_chr1_173303183_173303751
Length = 569
Score = 327 bits (169), Expect = 2e-94
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 gatcaactttctgtggagattaatttcctagaaagggaggggccccatccctgcttttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatcaactttctgtggagattaatttcctagaaagggaggggccccatccctgcttttct 260
Query: 61 actcctgatgacagaggtgggcaggccctttcctgtaggacctacccaaacccagagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcctgatgacagaggtgggcaggccctttcctgtaggacctacccaaacccagagaag 320
Query: 121 ccagaaagggaggtttgcctccccgcccaagtgtggagaacgaggagaa 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagaaagggaggtttgcctccccgcccaagtgtggagaacgaggagaa 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_p01.g1 MSMg01no402_p01.g1 CHROMAT_FILE:
MSMg01no402_p01.g1 PHD_FILE: MSMg01no402_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:02 2005
(337 letters)
>mm_chr1_173459025_173459760
Length = 736
Score = 482 bits (249), Expect = e-140
Identities = 306/325 (94%), Gaps = 4/325 (1%)
Strand = Plus / Minus
Query: 1 actgcaggatatgttcagttcagagtgtttaataatgagagagcagccagtgccttgtgt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 323 actgcaggatatgttcagttcagagtgtttaataatgagagagcggccagtgccttgtgt 264
Query: 61 gctggcatcaaggtcactggatgtaattctgaagc-tgtgagtcttttttaaaaatacta 119
|||||| | | |||||||||||||||| ||||| | |||||||| |||| ||||||||||
Sbjct: 263 gctggcgtgagggtcactggatgtaatactgaa-catgtgagtc-ttttaaaaaatacta 206
Query: 120 tttattttattattttaaattatgtatatatctgtatg-ttttgtgtatgtatatgcatg 178
|||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 205 tttattttattattttaaattatgtatatacctgtgtgtttttgtgtatgtatatgcatg 146
Query: 179 tgtgtacatgtacccttggaatccagaagaaggtgtcagattccctggaaatggagttat 238
||||| || ||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 145 tgtgtgcaagtacccttggaatccccaagaaggtgttagattccctggaaatggagttat 86
Query: 239 atgtgcttgtgacatgcctgacataggtgcttggtaacagaactgagatcctctgtaaaa 298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 85 atgtgcttgtgacatgcctgacataggtgcttgggaacagaactgagatcctctgcaaaa 26
Query: 299 gcagaaagtggtctgaattgttgag 323
|||||||||||||||||||||||||
Sbjct: 25 gcagaaagtggtctgaattgttgag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 736
Length adjustment: 9
Effective length of query: 328
Effective length of database: 727
Effective search space: 238456
Effective search space used: 238456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|