Query= MSMg01no406_b20.b1 MSMg01no406_b20.b1 CHROMAT_FILE:
MSMg01no406_b20.b1 PHD_FILE: MSMg01no406_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:19 2005
(504 letters)
>mm_chr1_184774363_184775266
Length = 904
Score = 576 bits (298), Expect = e-168
Identities = 319/326 (97%)
Strand = Plus / Minus
Query: 175 ttcaaacttgttttggcggttgctatgctcattctaaaatttgtgaggaaacctggaaga 234
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 904 ttcaaacttgttttggcggttgctatgctcattctaaaatttatgaggaaacctggaaga 845
Query: 235 ccacgaagatccaagacagctttgaaggaacagaaagagggtagcacttgtgttacgagc 294
||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 844 ccacgaagatccaagacagttttgaaggaacagaaagaggataacacttgtgttacgagc 785
Query: 295 atttaagaatgattacagggctaccgtaataaaaacaggatcacatctcttgcattaaca 354
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 784 atttaagaatgattacagggctacggtaataaaaacaggatcacatctattgcattaaca 725
Query: 355 gacagactaattaacagaacaggggattgagccaggacttccatttcctgacaaaggtgg 414
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 724 gacagactaattaacagaacagaggattgagccaggacttccatttcctgacaaaggtgg 665
Query: 415 gaacattcattccaatgaacagtgctatgtgtgttacatacaaaccaagcccaagaagaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaacattcattccaatgaacagtgctatgtgtgttacatacaaaccaagcccaagaagaa 605
Query: 475 tggttagcgggataaatatgcaggca 500
||||||||||||||||||||||||||
Sbjct: 604 tggttagcgggataaatatgcaggca 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_b20.g1 MSMg01no406_b20.g1 CHROMAT_FILE:
MSMg01no406_b20.g1 PHD_FILE: MSMg01no406_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:19 2005
(427 letters)
>mm_chr1_184597210_184598040
Length = 831
Score = 806 bits (417), Expect = 0.0
Identities = 426/431 (98%), Gaps = 4/431 (0%)
Strand = Plus / Plus
Query: 1 aaagctgtcctataaatgttaattatttaaaggctttctgagactgaagcagataattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagctgtcctataaatgttaattatttaaaggctttctgagactgaagcagataattac 260
Query: 61 tatttttctcaggctttctaatgaggagatggcacagggatggatggatg----cctttg 116
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tatttttctcaggctttctaatgaggagatggcacagggatggatggatggatgcctttg 320
Query: 117 cccaaggtcgtagtgcaggctgtctgagagacactgtgggagctgtattggcagcagtct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccaaggtcgtagtgcaggctgtctgagagacactgtgggagctgtattggcagcagtct 380
Query: 177 gccctgggttcctctttgtgcttggaaactggccttcttcccagcccctatcctgtcaat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccctgggttcctctttgtgcttggaaactggccttcttcccagcccctatcctgtcaat 440
Query: 237 agctctaagcatggccctgtcttcatacccaggggtctgtcataggtctacatgatccca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctctaagcatggccctgtcttcatacccaggggtctgtcataggtctacatgatccca 500
Query: 297 tatcatgctaccatctggagcctgccttgggttcaattgtgggacccacatgacagagaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatcatgctaccatctggagcctgccttgggttcaattgtgggacccacatgacagagaa 560
Query: 357 acaactcccacaaatgtcctatgatttccagcgcacactatggcatatagtgcagccccc 416
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 acaactcccacaaatgtcctatgatttcgagcgcacactatggcatatagtgcagccccc 620
Query: 417 tgcccccacat 427
|||||||||||
Sbjct: 621 tgcccccacat 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 831
Length adjustment: 9
Effective length of query: 418
Effective length of database: 822
Effective search space: 343596
Effective search space used: 343596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
